type: position_score
table:
  filename: ENCFF754YLR.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR813CTI
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR813CTI [biosample_summary="Homo sapiens H1" and target="H3K9ac"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR813CTI [biosample_summary="Homo sapiens H1" and target="H3K9ac"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1\n\n**summary**:\
    \ \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_error**: Processed\
    \ alignments file {ENCFF716HFX|/files/ENCFF716HFX/} processed by ChIP-seq ENCODE4\
    \ v1.6.1 GRCh38 pipeline has 4406422 usable fragments. The minimum ENCODE standard\
    \ for each replicate in a ChIP-seq experiment targeting H3K9ac-human and investigated\
    \ as a narrow histone mark is 10 million usable fragments. The recommended value\
    \ is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data\
    \ standards|/data-standards/chip-seq/})\n\n**audit\\_internal\\_action**: Released\
    \ analysis {ENCAN132GER|/analyses/ENCAN132GER/} has in progress subobject quality\
    \ standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\n\
    **audit\\_internal\\_action**: Released analysis {ENCAN132GER|/analyses/ENCAN132GER/}\
    \ has in progress subobject document {ba4bf327-5672-4603-95ac-22e65f4097f8|/documents/ba4bf327-5672-4603-95ac-22e65f4097f8/}"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR813CTI
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens H1
    replication_type: unreplicated
    biosample_ontology: /biosample-types/cell_line_EFO_0003042/
    perturbed: false
    doi: 10.17989/ENCSR813CTI
    date_created: '2015-09-15T20:27:05.563212+00:00'
    date_released: '2013-07-31'
    submitter_comment: "This experiment\u2019s alignments have been cropped to 50nt\
      \ for consistency against its control experiment."
    target: H3K9ac
