Resource

Id Histone_ChIP-seq/ENCSR812POEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR812POE [biosample_summary="Homo sapiens sigmoid colon tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR812POE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue female adult (53 years)
  • date_created: 2017-01-24T04:30:05.273902+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR812POE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR812POE float

Histone_ChIP-seq_ENCSR812POE
Histone_ChIP-seq ENCSR812POE [biosample_summary="Homo sapiens sigmoid colon tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR812POE [1.62, 10.8]
n
548,601
mean
3.33
sd
0.69

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5486010.02% 3124
chr1 44272 0.02% 241
chr2 40605 0.02% 241
chr3 38722 0.02% 228
chr4 28978 0.02% 174
chr5 28982 0.02% 181
chr6 31533 0.02% 173
chr7 27265 0.02% 164
chr8 23936 0.02% 145
chr9 21350 0.02% 127
chr10 26046 0.02% 148
chr11 26871 0.02% 155
chr12 25847 0.02% 148
chr13 16512 0.01% 104
chr14 15004 0.01% 86
chr15 17959 0.02% 98
chr16 18778 0.02% 104
chr17 17789 0.02% 96
chr18 12293 0.02% 73
chr19 17343 0.03% 96
chr20 16820 0.03% 93
chr21 6550 0.01% 34
chr22 8238 0.02% 43
chrM 11710 70.67% 12
chrX 24899 0.02% 158
chrY 299 <0.01% 2
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3124 100 4821 175.61 156
global segment-length histogram

Files

Filename Size md5
ENCFF392PEN.bed.gz 55.9 KB ea07260b78a88b0f6ffc262a5ded4974
ENCFF392PEN.tabix.bed.gz 30.74 KB 9b98c15e43429a932ee57a5e378ea6f8
ENCFF392PEN.tabix.bed.gz.tbi 36.26 KB fde7e14a6e7fce0a86e2d25d9bcea6aa
genomic_resource.yaml 1.99 KB 990e69804a88bcadb69a2226cc128027
statistics/