Resource

Id Histone_ChIP-seq/ENCSR805OCDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR805OCD [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR805OCD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)
  • date_created: 2017-12-06T21:05:01.333900+00:00
  • date_released: 2019-09-13
  • doi: 10.17989/ENCSR805OCD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR805OCD float

Histone_ChIP-seq_ENCSR805OCD
Histone_ChIP-seq ENCSR805OCD [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR805OCD [1.3, 9.57]
n
73,191,256
mean
3.88
sd
1.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 731912562.27% 45278
chr1 7499743 3.01% 4555
chr1_KI270711v1_random 1528 3.62% 2
chr2 5304027 2.19% 3565
chr3 4259331 2.15% 2846
chr4 2663532 1.40% 1944
chr5 3521933 1.94% 2301
chr6 3087288 1.81% 2046
chr7 3250109 2.04% 2076
chr8 2219649 1.53% 1550
chr9 3371175 2.44% 2087
chr10 3244304 2.42% 2064
chr11 3931428 2.91% 2270
chr12 4374998 3.28% 2522
chr13 1353815 1.18% 984
chr14 2547301 2.38% 1645
chr15 2774155 2.72% 1826
chr16 3664662 4.06% 1979
chr17 4386999 5.27% 2458
chr18 1039597 1.29% 772
chr19 5270909 8.99% 2519
chr20 2206743 3.42% 1384
chr21 865480 1.85% 545
chr22 1993840 3.92% 1060
chr22_KI270733v1_random 474 0.26% 1
chrM 6358 38.37% 1
chrUn_KI270467v1 815 20.79% 1
chrX 334317 0.21% 264
chrY 16746 0.03% 11
3338 contigs with no values (128834614 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45278 300 31949 1616.49 1177
global segment-length histogram

Files

Filename Size md5
ENCFF069YPB.bed.gz 1023.85 KB c8160c6df9dfec78f051035f40df51d9
ENCFF069YPB.tabix.bed.gz 486.98 KB dce724e5cc218013723a7808f1a77370
ENCFF069YPB.tabix.bed.gz.tbi 118.16 KB 5d48d5ae97d1e78a0c99268ad57fb538
genomic_resource.yaml 1.55 KB 824460105993026c8f8e198c63c4d330
statistics/