Resource

Id Histone_ChIP-seq/ENCSR799SRLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR799SRL [biosample_summary="Homo sapiens neuronal stem cell originated from H1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR799SRL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_CL_0000047/
  • biosample_summary: Homo sapiens neuronal stem cell originated from H1
  • date_created: 2015-10-01T07:15:58.535717+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR799SRL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR799SRL float

Histone_ChIP-seq_ENCSR799SRL
Histone_ChIP-seq ENCSR799SRL [biosample_summary="Homo sapiens neuronal stem cell originated from H1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR799SRL [1.2, 45.6]
n
18,858,352
mean
8.87
sd
6.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 188583520.59% 33346
chr1 1906710 0.77% 3171
chr2 1379648 0.57% 2443
chr3 1095102 0.55% 1950
chr4 759789 0.40% 1411
chr5 903402 0.50% 1677
chr6 1108041 0.65% 1930
chr7 894435 0.56% 1579
chr8 723120 0.50% 1334
chr9 816045 0.59% 1418
chr10 811767 0.61% 1444
chr11 1021847 0.76% 1758
chr12 1070555 0.80% 1757
chr13 484741 0.42% 829
chr14 677307 0.63% 1127
chr15 581964 0.57% 1015
chr16 589929 0.65% 1168
chr17 1062629 1.28% 1812
chr18 364442 0.45% 649
chr19 926600 1.58% 1736
chr20 498555 0.77% 906
chr21 184294 0.39% 348
chr22 421963 0.83% 757
chrX 552475 0.35% 1090
chrY 22992 0.04% 37
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33346 130 6956 565.54 417
global segment-length histogram

Files

Filename Size md5
ENCFF935IOQ.bed.gz 825.27 KB 3b2cd754ec2f8ce060d9dd42fff74b25
ENCFF935IOQ.tabix.bed.gz 362.04 KB 15b568299801f6249556214aae5ff8d9
ENCFF935IOQ.tabix.bed.gz.tbi 166.61 KB d849c2599fab1238f3a43129e8199e82
genomic_resource.yaml 1.49 KB 5e2eceb8aa6c01ccb670240e0f9ab302
statistics/