Resource

Id Histone_ChIP-seq/ENCSR798YAUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR798YAU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (84 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR798YAU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (84 years)
  • date_created: 2021-01-28T04:10:52.124108+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR798YAU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR798YAU float

Histone_ChIP-seq_ENCSR798YAU
Histone_ChIP-seq ENCSR798YAU [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (84 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR798YAU [1.57, 12.8]
n
76,978,071
mean
4.31
sd
1.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 769780712.39% 70082
chr1 2639135 1.06% 2444
chr2 2640257 1.09% 2352
chr3 1005277 0.51% 954
chr4 1460855 0.77% 1263
chr5 1888260 1.04% 1589
chr6 2485471 1.46% 1865
chr7 1872065 1.17% 1587
chr8 1524679 1.05% 1503
chr9 1098091 0.79% 996
chr10 2262828 1.69% 2149
chr11 1266804 0.94% 1223
chr12 1703957 1.28% 1431
chr13 872358 0.76% 773
chr14 1827941 1.71% 1592
chr15 1619997 1.59% 1576
chr16 1750197 1.94% 1740
chr17 2078738 2.50% 1657
chr18 772720 0.96% 772
chr19 1712730 2.92% 1575
chr20 1433103 2.22% 1446
chr21 793810 1.70% 783
chr22 655059 1.29% 710
chrX 41612392 26.67% 38100
chrY 1347 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70082 235 55029 1098.4 775
global segment-length histogram

Files

Filename Size md5
ENCFF149ZZG.bed.gz 1.28 MB d424f32407ce9b9acebf5c07dbc9fcce
ENCFF149ZZG.tabix.bed.gz 681.31 KB 43c10831264a4852e74dce23bfa63c85
ENCFF149ZZG.tabix.bed.gz.tbi 149.04 KB 0b7f0cb789edd487283927146c7f10de
genomic_resource.yaml 1.57 KB 9f78bcb28c6be5b7bd3b0e5b8d96191e
statistics/