Resource

Id Histone_ChIP-seq/ENCSR798RTUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR798RTU [biosample_summary="Homo sapiens caudate nucleus tissue female adult (75 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR798RTU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001873/
  • biosample_summary: Homo sapiens caudate nucleus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:04.256149+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR798RTU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR798RTU float

Histone_ChIP-seq_ENCSR798RTU
Histone_ChIP-seq ENCSR798RTU [biosample_summary="Homo sapiens caudate nucleus tissue female adult (75 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR798RTU [1.97, 95.6]
n
71,347,733
mean
11.5
sd
8.64

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 713477332.22% 84258
chr1 7224808 2.90% 8267
chr2 5294189 2.19% 6320
chr3 4406767 2.22% 5303
chr4 2899548 1.52% 3621
chr5 3650891 2.01% 4376
chr6 3824797 2.24% 4616
chr7 3170336 1.99% 4059
chr8 2697260 1.86% 3378
chr9 3388633 2.45% 3824
chr10 3815251 2.85% 4373
chr11 4331482 3.21% 4901
chr12 3456916 2.59% 4114
chr13 1604018 1.40% 1954
chr14 2708635 2.53% 3083
chr15 2428100 2.38% 2902
chr16 2573105 2.85% 3055
chr17 3936192 4.73% 4326
chr18 1421985 1.77% 1677
chr19 2757231 4.70% 3197
chr20 1953417 3.03% 2286
chr21 893506 1.91% 1074
chr22 1723694 3.39% 1938
chrX 1186972 0.76% 1614
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 84258 175 17771 846.78 596
global segment-length histogram

Files

Filename Size md5
ENCFF683NWP.bed.gz 1.76 MB dd9ba2528db51293c8af6d2f074ed289
ENCFF683NWP.tabix.bed.gz 861.4 KB bfd585d4055882cdb6d1c27d39dbc872
ENCFF683NWP.tabix.bed.gz.tbi 256.73 KB b250fc8f880b2a9933802270ffc2b321
genomic_resource.yaml 2.0 KB 06b8b8a8ef0d1f4769fbe211fe23b605
statistics/