Resource

Id Histone_ChIP-seq/ENCSR796SRFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR796SRF [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR796SRF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue female child (16 years)
  • date_created: 2021-01-28T22:01:58.835042+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR796SRF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR796SRF float

Histone_ChIP-seq_ENCSR796SRF
Histone_ChIP-seq ENCSR796SRF [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR796SRF [1.45, 5.26]
n
1,099,305
mean
3.15
sd
0.499

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 10993050.03% 2161
chr1 50744 0.02% 102
chr2 53826 0.02% 123
chr3 32050 0.02% 77
chr4 67348 0.04% 136
chr5 58961 0.03% 128
chr6 35233 0.02% 78
chr7 58373 0.04% 123
chr8 35954 0.02% 83
chr9 39729 0.03% 71
chr10 35182 0.03% 75
chr11 26003 0.02% 60
chr12 81067 0.06% 149
chr13 22275 0.02% 53
chr14 24064 0.02% 51
chr15 19289 0.02% 39
chr16 39470 0.04% 74
chr17 18569 0.02% 36
chr18 16830 0.02% 38
chr19 299685 0.51% 479
chr20 12416 0.02% 29
chr21 28787 0.06% 51
chr22 11085 0.02% 21
chrX 32365 0.02% 85
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2161 200 2859 508.7 423
global segment-length histogram

Files

Filename Size md5
ENCFF123LPW.bed.gz 43.76 KB cafcc8925658ce51d8b89cfb308fbaf8
ENCFF123LPW.tabix.bed.gz 22.94 KB 2d98f62b1b16330b38360cce7be5a606
ENCFF123LPW.tabix.bed.gz.tbi 21.39 KB 024f4d4657f77415d84ce744cb352aad
genomic_resource.yaml 1.5 KB ec931630e0de11982b8d01a0736cbf59
statistics/