Resource

Id Histone_ChIP-seq/ENCSR791LZYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR791LZY [biosample_summary="Homo sapiens transverse colon tissue female adult (53 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR791LZY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue female adult (53 years)
  • date_created: 2017-01-24T04:32:43.072568+00:00
  • date_released: 2017-01-30
  • doi: 10.17989/ENCSR791LZY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR791LZY float

Histone_ChIP-seq_ENCSR791LZY
Histone_ChIP-seq ENCSR791LZY [biosample_summary="Homo sapiens transverse colon tissue female adult (53 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR791LZY [1.27, 7.01]
n
2,900,763
mean
3.57
sd
0.693

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 29007630.09% 10031
chr1 316187 0.13% 1071
chr2 208248 0.09% 734
chr3 157165 0.08% 589
chr4 94610 0.05% 386
chr5 131437 0.07% 464
chr6 128768 0.08% 479
chr7 89699 0.06% 336
chr8 102945 0.07% 359
chr9 149677 0.11% 497
chr10 168216 0.13% 591
chr11 186936 0.14% 639
chr12 158843 0.12% 528
chr13 49214 0.04% 191
chr14 120059 0.11% 406
chr15 103654 0.10% 358
chr16 123030 0.14% 406
chr17 208638 0.25% 649
chr18 38465 0.05% 148
chr19 153822 0.26% 478
chr20 91102 0.14% 307
chr21 21119 0.05% 84
chr22 85509 0.17% 277
chrUn_KI270466v1 192 15.57% 1
chrUn_KI270467v1 1005 25.64% 2
chrX 12223 0.01% 51
3341 contigs with no values (186299347 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 10031 110 1909 289.18 250
global segment-length histogram

Files

Filename Size md5
ENCFF552DJF.bed.gz 189.88 KB 5850ade3c91a1b0bc449e24b54b5713c
ENCFF552DJF.tabix.bed.gz 100.38 KB 6b768cddf174f807e963140e78e33afc
ENCFF552DJF.tabix.bed.gz.tbi 72.79 KB 98b3d000b33cc7b5076281749d1f37be
genomic_resource.yaml 1.52 KB b88cf62dac60768c249101c2b0e5ef10
statistics/