Resource

Id Histone_ChIP-seq/ENCSR791INMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR791INM [biosample_summary="Homo sapiens SK-N-SH" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR791INM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003072/
  • biosample_summary: Homo sapiens SK-N-SH
  • date_created: 2015-05-19T17:02:54.232962+00:00
  • date_released: 2017-01-12
  • doi: 10.17989/ENCSR791INM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR791INM float

Histone_ChIP-seq_ENCSR791INM
Histone_ChIP-seq ENCSR791INM [biosample_summary="Homo sapiens SK-N-SH" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR791INM [1.24, 24.8]
n
94,291,316
mean
7.17
sd
3.78

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 942913162.93% 74485
chr1 9006227 3.62% 7006
chr1_KI270712v1_random 2027 1.15% 4
chr1_KI270713v1_random 436 1.07% 1
chr2 7333735 3.03% 5947
chr3 5987571 3.02% 4780
chr4 4561531 2.40% 3877
chr5 5333826 2.94% 4250
chr6 5532093 3.24% 4350
chr7 5171275 3.25% 4144
chr8 3960484 2.73% 3327
chr9 3909174 2.82% 3108
chr9_KI270719v1_random 2150 1.22% 2
chr10 4440105 3.32% 3534
chr11 4897839 3.63% 3717
chr12 5050454 3.79% 3830
chr13 2316777 2.03% 2012
chr14 2969743 2.77% 2335
chr14_GL000009v2_random 791 0.39% 2
chr14_GL000194v1_random 423 0.22% 1
chr14_GL000225v1_random 738 0.35% 1
chr14_KI270722v1_random 1630 0.84% 1
chr14_KI270723v1_random 693 1.82% 1
chr15 3213311 3.15% 2541
chr16 3114296 3.45% 2360
chr17 4834248 5.81% 3415
chr17_GL000205v2_random 3997 2.15% 5
chr18 1795242 2.23% 1529
chr19 3731166 6.37% 2637
chr20 2260809 3.51% 1829
chr21 903045 1.93% 770
chr22 1608361 3.16% 1192
chrUn_GL000195v1 2631 1.44% 4
chrUn_GL000214v1 394 0.29% 1
chrUn_GL000219v1 4153 2.32% 6
chrUn_GL000220v1 416 0.26% 1
chrUn_KI270438v1 1362 1.21% 3
chrUn_KI270442v1 2675 0.68% 4
chrUn_KI270467v1 1095 27.93% 2
chrUn_KI270754v1 1216 3.03% 3
chrX 2333177 1.50% 1953
3326 contigs with no values (183678469 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74485 240 22782 1265.91 925
global segment-length histogram

Files

Filename Size md5
ENCFF807OBU.bed.gz 1.9 MB e7a482cd49e20647ac8a0bae30e7fd48
ENCFF807OBU.tabix.bed.gz 832.24 KB 3406ae923a3201387cf2989965838c69
ENCFF807OBU.tabix.bed.gz.tbi 301.61 KB e62f4924075b32506dec8e34c7aef60f
genomic_resource.yaml 1.37 KB b9066446032ced6f2d0e5512b6a9c4c4
statistics/