Resource

Id Histone_ChIP-seq/ENCSR787YHRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR787YHR [biosample_summary="Homo sapiens spleen tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR787YHR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue male adult (54 years)
  • date_created: 2017-12-06T21:20:31.444161+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR787YHR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR787YHR float

Histone_ChIP-seq_ENCSR787YHR
Histone_ChIP-seq ENCSR787YHR [biosample_summary="Homo sapiens spleen tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR787YHR [1.17, 40.4]
n
288,991,033
mean
7.79
sd
4.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2889910338.98% 92992
chr1 27620159 11.09% 8823
chr2 23225646 9.59% 7821
chr3 18719790 9.44% 6288
chr4 12169741 6.40% 4536
chr5 14732812 8.12% 4790
chr6 14253451 8.34% 4957
chr7 14335227 9.00% 5281
chr8 10672903 7.35% 3693
chr9 12324447 8.91% 4116
chr10 12983679 9.70% 4492
chr11 13722133 10.16% 3976
chr12 15367812 11.53% 4520
chr13 6617838 5.79% 2455
chr14 10180670 9.51% 3213
chr15 10828073 10.62% 3383
chr16 12148018 13.45% 3314
chr17 15006087 18.02% 4350
chr18 5062754 6.30% 1891
chr19 14393447 24.55% 3484
chr20 8106070 12.58% 2240
chr21 3364054 7.20% 926
chr22 6985692 13.75% 1884
chrX 5812612 3.73% 2380
chrY 357918 0.63% 179
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92992 260 130614 3107.7 1253
global segment-length histogram

Files

Filename Size md5
ENCFF487VBA.bed.gz 2.23 MB d96de09eee14055bad30dc35035e2e38
ENCFF487VBA.tabix.bed.gz 1013.52 KB 1431100c7e72f2beb970bd880d9062c0
ENCFF487VBA.tabix.bed.gz.tbi 145.8 KB 0ebba2e1b42340b470595f5d2f4498ae
genomic_resource.yaml 1.48 KB f13a219af61b91f98a81032070f2093e
statistics/