Resource

Id Histone_ChIP-seq/ENCSR786ALMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR786ALM [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR786ALM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female child (16 years)
  • date_created: 2022-05-11T01:54:34.099523+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR786ALM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR786ALM float

Histone_ChIP-seq_ENCSR786ALM
Histone_ChIP-seq ENCSR786ALM [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR786ALM [1.98, 71.6]
n
43,785,827
mean
28.5
sd
16.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 437858271.36% 29135
chr1 4348912 1.75% 2902
chr2 3099738 1.28% 2037
chr3 2537290 1.28% 1691
chr4 1936470 1.02% 1292
chr5 2061767 1.14% 1377
chr6 2497753 1.46% 1693
chr7 2142230 1.34% 1478
chr8 1623263 1.12% 1148
chr9 1864623 1.35% 1260
chr10 1963036 1.47% 1270
chr11 2332811 1.73% 1470
chr12 2276108 1.71% 1470
chr13 900633 0.79% 651
chr14 1465960 1.37% 947
chr15 1350280 1.32% 904
chr16 1778981 1.97% 1173
chr17 2435184 2.92% 1527
chr18 799387 0.99% 557
chr19 2571136 4.39% 1715
chr20 1096701 1.70% 745
chr21 456966 0.98% 302
chr22 989923 1.95% 671
chrX 1256675 0.81% 855
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29135 195 12904 1502.86 1196
global segment-length histogram

Files

Filename Size md5
ENCFF551BYI.bed.gz 783.23 KB 622f0e961090c5a71e8bc2f1d0723b7d
ENCFF551BYI.tabix.bed.gz 337.4 KB d2dded41eda4592cc26fe5b2891440e0
ENCFF551BYI.tabix.bed.gz.tbi 178.62 KB a4f71511ea06fd68c5adc5d0d29aadc6
genomic_resource.yaml 1.53 KB 373040a5f82c14ccc3ba1233e23eb5a4
statistics/