Histone_ChIP-seq_ENCSR780CNW
Histone_ChIP-seq ENCSR780CNW [biosample_summary="Homo sapiens tibial artery tissue male adult (37 years)" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR780CNW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR780CNW [biosamplesummary="Homo sapiens tibial artery tissue male adult (37 years)" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (37 years) output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN081RUZ|/analyses/ENCAN081RUZ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF858RSO|/files/ENCFF858RSO/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR780CNW | float |
Histone_ChIP-seq_ENCSR780CNW |
Histone_ChIP-seq ENCSR780CNW [biosample_summary="Homo sapiens tibial artery tissue male adult (37 years)" and target="H3K4me3"]
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[1.68, 87.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF318TGO.bed.gz | 869.99 KB | 0481228fb36d7ca85eff730e48c1eea3 |
| ENCFF318TGO.bed.gz.dvc | 100.0 B | aa4be2c9d901e7eb3d7190044c97487e |
| ENCFF318TGO.tabix.bed.gz | 362.5 KB | e4014b71d91be9d2664f46ed7f13bc19 |
| ENCFF318TGO.tabix.bed.gz.dvc | 106.0 B | 959b0ae511f80dcca8ff86e219b19a52 |
| ENCFF318TGO.tabix.bed.gz.tbi | 188.36 KB | dd1bdc85d1a1c8312dc7aaa766eafad4 |
| ENCFF318TGO.tabix.bed.gz.tbi.dvc | 110.0 B | 4e665e94d959e8d042cfad59173897f6 |
| genomic_resource.yaml | 2.14 KB | e7793a8312c5fa5a04e1b94ac1936a00 |
| genomic_resource_original.yaml | 2.0 KB | 3877462650e73013555a773bedfa458e |
| statistics/ |