Resource

Id Histone_ChIP-seq/ENCSR779KYWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR779KYW [biosample_summary="Homo sapiens OCI-LY3" and target="H4K20me1"]
Description
Labels
  • accession: ENCSR779KYW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006710/
  • biosample_summary: Homo sapiens OCI-LY3
  • date_created: 2014-02-20T05:42:59.622321+00:00
  • date_released: 2016-11-04
  • doi: 10.17989/ENCSR779KYW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H4K20me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR779KYW float

Histone_ChIP-seq_ENCSR779KYW
Histone_ChIP-seq ENCSR779KYW [biosample_summary="Homo sapiens OCI-LY3" and target="H4K20me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR779KYW [1.57, 19.1]
n
60,407,185
mean
5.14
sd
2.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 604071851.88% 59470
chr1 4681165 1.88% 4886
chr2 4363434 1.80% 4417
chr3 4770067 2.41% 4449
chr4 2520242 1.32% 2658
chr5 2310885 1.27% 2370
chr6 2898710 1.70% 2812
chr7 3572096 2.24% 3513
chr8 2461446 1.70% 2493
chr9 2749485 1.99% 2812
chr10 2228564 1.67% 2362
chr11 3242021 2.40% 3115
chr12 2963864 2.22% 2946
chr13 1628008 1.42% 1538
chr14 1640106 1.53% 1712
chr15 2266399 2.22% 2357
chr16 2639087 2.92% 2386
chr17 2309228 2.77% 2419
chr18 1918385 2.39% 1495
chr19 2620475 4.47% 2526
chr20 2518289 3.91% 2210
chr21 512687 1.10% 442
chr22 2340765 4.61% 2119
chrX 1166507 0.75% 1325
chrY 85270 0.15% 108
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 59470 180 51777 1015.76 623
global segment-length histogram

Files

Filename Size md5
ENCFF602LBP.bed.gz 1.35 MB 3cf61373c0e5677095a092ae893edfcb
ENCFF602LBP.tabix.bed.gz 621.9 KB 7190c3b3a570f0496afadfa1ac319a1e
ENCFF602LBP.tabix.bed.gz.tbi 115.43 KB 8157203403483bbe16e06f23afcfc729
genomic_resource.yaml 2.11 KB 458112e10126ddcaf5b94ba0e0c2ebcc
statistics/