Resource

Id Histone_ChIP-seq/ENCSR778NQScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR778NQS [biosample_summary="Homo sapiens A549" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR778NQS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001086/
  • biosample_summary: Homo sapiens A549
  • date_created: 2017-10-13T20:55:41.313037+00:00
  • date_released: 2017-10-19
  • doi: 10.17989/ENCSR778NQS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR778NQS float

Histone_ChIP-seq_ENCSR778NQS
Histone_ChIP-seq ENCSR778NQS [biosample_summary="Homo sapiens A549" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR778NQS [1.45, 35.4]
n
165,828,225
mean
8.83
sd
6.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1658282255.15% 129753
chr1 15372928 6.17% 11803
chr2 13898088 5.74% 11227
chr3 9341607 4.71% 7866
chr4 6320661 3.32% 5668
chr5 9050960 4.99% 7606
chr6 9094098 5.32% 7681
chr7 8376272 5.26% 7066
chr8 8494220 5.85% 6705
chr9 7807554 5.64% 5982
chr10 8637710 6.46% 6798
chr11 8237052 6.10% 6036
chr12 8505180 6.38% 6720
chr13 2755740 2.41% 2566
chr14 5249658 4.90% 4038
chr15 5597174 5.49% 4340
chr16 5681932 6.29% 3938
chr17 8819164 10.59% 6102
chr18 3545941 4.41% 2908
chr19 5686419 9.70% 3771
chr20 6027950 9.35% 4103
chr21 1679875 3.60% 1272
chr22 3586538 7.06% 2273
chrX 4005042 2.57% 3235
chrY 56462 0.10% 49
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129753 217 81322 1278.03 671
global segment-length histogram

Files

Filename Size md5
ENCFF747IZX.bed.gz 3.34 MB 29e527c0e241ca914ebaa38f6acdc522
ENCFF747IZX.tabix.bed.gz 1.39 MB 28a37359b83c8664e2f4aff0e62513ef
ENCFF747IZX.tabix.bed.gz.tbi 270.15 KB e5cdd9a71d6749dd2c17c324a8a8faa7
genomic_resource.yaml 1.59 KB d16e0e021058747387875950bad7f508
statistics/