Resource

Id Histone_ChIP-seq/ENCSR776TJTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR776TJT [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR776TJT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:46.601145+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR776TJT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR776TJT float

Histone_ChIP-seq_ENCSR776TJT
Histone_ChIP-seq ENCSR776TJT [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR776TJT [1.72, 63.2]
n
140,451,354
mean
13.1
sd
10.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1404513544.37% 71298
chr1 14235791 5.72% 7035
chr2 10448430 4.31% 5476
chr3 8427873 4.25% 4419
chr4 6345368 3.34% 3158
chr5 7706750 4.25% 4136
chr6 7513162 4.40% 3808
chr7 6716934 4.22% 3615
chr8 5417644 3.73% 2884
chr9 7189003 5.19% 3410
chr10 7175770 5.36% 3407
chr11 8305219 6.15% 3941
chr12 6974671 5.23% 3678
chr13 3542717 3.10% 1814
chr14 4860396 4.54% 2405
chr15 5049020 4.95% 2501
chr16 4511728 4.99% 2393
chr17 7510060 9.02% 3640
chr18 2837235 3.53% 1465
chr19 5192423 8.86% 2662
chr20 3854441 5.98% 1938
chr21 1494345 3.20% 777
chr22 2803333 5.52% 1440
chrX 2339041 1.50% 1296
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 71298 255 104367 1969.92 1202
global segment-length histogram

Files

Filename Size md5
ENCFF128AQO.bed.gz 1.65 MB d0b7d63ea4ce214e2b518b7de72632f3
ENCFF128AQO.tabix.bed.gz 771.17 KB 0b62d055a680c2b5ad5a2f970cdb4ec2
ENCFF128AQO.tabix.bed.gz.tbi 227.47 KB d9b5dd4f925d1f1d0033faf2811693be
genomic_resource.yaml 1.77 KB bf2021a17c9b1e89120ae6825d978981
statistics/