Resource

Id Histone_ChIP-seq/ENCSR776KLScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR776KLS [biosample_summary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR776KLS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002370/
  • biosample_summary: Homo sapiens thymus tissue female embryo (110 days)
  • date_created: 2015-09-16T21:43:01.631968+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR776KLS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (110 days)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR776KLS float

Histone_ChIP-seq_ENCSR776KLS
Histone_ChIP-seq ENCSR776KLS [biosample_summary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR776KLS [1.78, 83.2]
n
51,029,261
mean
15.7
sd
13.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 510292611.59% 63855
chr1 4863626 1.95% 5971
chr2 4082133 1.69% 5048
chr3 3184821 1.61% 4042
chr4 1932660 1.02% 2424
chr5 2460799 1.36% 3067
chr6 3074700 1.80% 3716
chr7 2327499 1.46% 3040
chr8 1836615 1.27% 2597
chr9 2061073 1.49% 2701
chr10 2477509 1.85% 3219
chr11 2496404 1.85% 3045
chr12 2758764 2.07% 3257
chr13 1231165 1.08% 1494
chr14 2165182 2.02% 2475
chr15 1766365 1.73% 2203
chr16 1931542 2.14% 2440
chr17 2834411 3.40% 3425
chr18 925606 1.15% 1286
chr19 2031081 3.46% 2619
chr20 1265056 1.96% 1663
chr21 764991 1.64% 940
chr22 1202240 2.37% 1532
chrX 1355019 0.87% 1651
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63855 150 23388 799.14 498
global segment-length histogram

Files

Filename Size md5
ENCFF419EUC.bed.gz 1.43 MB 261a7be40a1bb446a39221ef89da07d7
ENCFF419EUC.tabix.bed.gz 673.64 KB eab30f0169f76676e104df24dbde853f
ENCFF419EUC.tabix.bed.gz.tbi 215.61 KB b0a25241683a7530701da134a34a8d79
genomic_resource.yaml 1.5 KB a7dc3dcf28f4f9638fa39e1445f931e6
statistics/