Resource

Id Histone_ChIP-seq/ENCSR775LGEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR775LGE [biosample_summary="Homo sapiens sigmoid colon tissue male adult (54 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR775LGE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male adult (54 years)
  • date_created: 2017-12-06T21:10:42.821211+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR775LGE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR775LGE float

Histone_ChIP-seq_ENCSR775LGE
Histone_ChIP-seq ENCSR775LGE [biosample_summary="Homo sapiens sigmoid colon tissue male adult (54 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR775LGE [1.58, 12.2]
n
125,162,978
mean
4.19
sd
1.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1251629783.89% 95892
chr1 12575270 5.05% 9224
chr1_KI270712v1_random 3131 1.78% 4
chr2 10148871 4.19% 7867
chr3 8778292 4.43% 6827
chr4 5478802 2.88% 4606
chr5 6297023 3.47% 5090
chr6 6153862 3.60% 5215
chr7 6159272 3.87% 5040
chr8 5147150 3.55% 4161
chr9 6191074 4.47% 4429
chr10 7461704 5.58% 5381
chr11 6786078 5.02% 4917
chr12 6444919 4.84% 4924
chr13 3037102 2.66% 2440
chr14 4304840 4.02% 3195
chr15 4278496 4.19% 3263
chr16 4381838 4.85% 3232
chr17 6225899 7.48% 4318
chr17_GL000205v2_random 1489 0.80% 1
chr18 2356166 2.93% 1929
chr19 4329579 7.39% 3167
chr20 3501098 5.43% 2541
chr21 1292661 2.77% 1059
chr22 2847622 5.60% 1966
chrX 958416 0.61% 1063
chrY 22324 0.04% 33
3340 contigs with no values (128715451 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 95892 240 42063 1305.25 986
global segment-length histogram

Files

Filename Size md5
ENCFF442KWF.bed.gz 2.23 MB afbf0abc4840d6630205d192c0004576
ENCFF442KWF.tabix.bed.gz 1.01 MB 7e8eec4618a3d9c849a72fc155ad16f4
ENCFF442KWF.tabix.bed.gz.tbi 295.15 KB 77392322d608c04f11adaff3f4c601d2
genomic_resource.yaml 1.5 KB ba65c2467fbdbfc601612569941c9caf
statistics/