Resource

Id Histone_ChIP-seq/ENCSR773TWRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR773TWR [biosample_summary="Homo sapiens small intestine tissue male embryo (108 days)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR773TWR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002108/
  • biosample_summary: Homo sapiens small intestine tissue male embryo (108 days)
  • date_created: 2015-09-16T21:42:45.683918+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR773TWR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (108 days)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR773TWR float

Histone_ChIP-seq_ENCSR773TWR
Histone_ChIP-seq ENCSR773TWR [biosample_summary="Homo sapiens small intestine tissue male embryo (108 days)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR773TWR [1.95, 27.9]
n
48,801,320
mean
6.56
sd
2.66

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 488013201.52% 93007
chr1 3168840 1.27% 6211
chr1_KI270709v1_random 2538 3.80% 2
chr1_KI270712v1_random 1029 0.58% 2
chr1_KI270713v1_random 559 1.37% 1
chr2 3899580 1.61% 7682
chr2_KI270716v1_random 273 0.18% 1
chr3 3017279 1.52% 5994
chr4 3242236 1.70% 6347
chr4_GL000008v2_random 4387 2.09% 1
chr5 3022202 1.66% 5850
chr5_GL000208v1_random 954 1.03% 3
chr6 2870595 1.68% 5728
chr7 3326249 2.09% 6178
chr8 2803042 1.93% 5021
chr9 1658055 1.20% 3187
chr9_KI270720v1_random 313 0.80% 1
chr10 2176259 1.63% 4419
chr11 2098547 1.55% 4040
chr12 2549639 1.91% 4615
chr13 1520414 1.33% 3030
chr14 1597247 1.49% 3063
chr14_GL000194v1_random 410 0.21% 1
chr14_GL000225v1_random 6263 2.97% 13
chr14_KI270722v1_random 4659 2.40% 9
chr15 1221485 1.20% 2259
chr16 1205320 1.33% 2171
chr16_KI270728v1_random 493 0.03% 2
chr17 1047105 1.26% 1976
chr17_GL000205v2_random 23416 12.62% 29
chr17_KI270729v1_random 3102 1.10% 6
chr17_KI270730v1_random 4626 4.11% 9
chr18 1173126 1.46% 2361
chr19 3650839 6.23% 5868
chr20 841889 1.31% 1649
chr21 700283 1.50% 1384
chr22 470988 0.93% 927
chr22_KI270732v1_random 1561 3.76% 2
chr22_KI270733v1_random 2270 1.26% 4
chr22_KI270735v1_random 1442 3.37% 2
chr22_KI270736v1_random 11640 6.40% 20
chrUn_GL000214v1 204 0.15% 1
chrUn_GL000216v2 497 0.28% 2
chrUn_GL000219v1 3360 1.88% 8
chrUn_GL000224v1 2340 1.30% 5
chrUn_KI270429v1 421 30.93% 1
chrUn_KI270438v1 1573 1.40% 4
chrUn_KI270442v1 11762 3.00% 20
chrUn_KI270519v1 609 0.44% 1
chrUn_KI270538v1 497 0.54% 1
chrUn_KI270589v1 2661 5.98% 2
chrUn_KI270591v1 467 8.06% 1
chrUn_KI270744v1 3489 2.07% 5
chrUn_KI270746v1 549 0.83% 2
chrUn_KI270751v1 907 0.60% 1
chrUn_KI270754v1 183 0.46% 1
chrUn_KI270756v1 410 0.52% 1
chrUn_KI270757v1 660 0.93% 1
chrX 1366584 0.88% 2719
chrY 72993 0.13% 163
3307 contigs with no values (122768131 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93007 170 29655 524.71 411
global segment-length histogram

Files

Filename Size md5
ENCFF274KHB.bed.gz 1.76 MB 21f58c84de1edb76e1d2aa6e4c2c99d8
ENCFF274KHB.tabix.bed.gz 896.74 KB 3e5cf1491d4bb1f8a7358fc8f52b1746
ENCFF274KHB.tabix.bed.gz.tbi 370.13 KB 7194ba42193cae00ad2625b4bbdd6ee6
genomic_resource.yaml 2.0 KB cd930b42597e71f05bae80385df3d778
statistics/