Resource

Id Histone_ChIP-seq/ENCSR767NIFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR767NIF [biosample_summary="Homo sapiens skeletal muscle tissue tissue female adult (72 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR767NIF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001134/
  • biosample_summary: Homo sapiens skeletal muscle tissue tissue female adult (72 years)
  • date_created: 2015-09-15T19:51:56.205423+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR767NIF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (72 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR767NIF float

Histone_ChIP-seq_ENCSR767NIF
Histone_ChIP-seq ENCSR767NIF [biosample_summary="Homo sapiens skeletal muscle tissue tissue female adult (72 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR767NIF [1.81, 72.6]
n
49,547,883
mean
18.9
sd
12.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 495478831.54% 47179
chr1 4955545 1.99% 4618
chr2 3547731 1.46% 3431
chr3 2937791 1.48% 2712
chr4 1983374 1.04% 1877
chr5 2366741 1.30% 2201
chr6 2880653 1.69% 2669
chr7 2328250 1.46% 2291
chr8 1903540 1.31% 1823
chr9 2055284 1.49% 1990
chr10 2287946 1.71% 2211
chr11 2691173 1.99% 2399
chr12 2574843 1.93% 2360
chr13 1030063 0.90% 1041
chr14 1594871 1.49% 1466
chr15 1630836 1.60% 1613
chr16 1945373 2.15% 1892
chr17 2818623 3.39% 2654
chr18 876309 1.09% 880
chr19 2943059 5.02% 2914
chr20 1266839 1.97% 1237
chr21 501027 1.07% 529
chr22 1125762 2.22% 1134
chrX 1299721 0.83% 1231
chrY 2529 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 47179 175 14060 1050.21 697
global segment-length histogram

Files

Filename Size md5
ENCFF175WXE.bed.gz 1.11 MB ada7245c405cf907837486bf6587092f
ENCFF175WXE.tabix.bed.gz 509.8 KB bf75f39eb0cc8a40925cafbd9fe37232
ENCFF175WXE.tabix.bed.gz.tbi 210.1 KB 40a387af3f200288974ad8c98e1f63d3
genomic_resource.yaml 1.55 KB 26d9431606bd5497311dfeebcc9fcd5d
statistics/