Histone_ChIP-seq_ENCSR767HHW
Histone_ChIP-seq ENCSR767HHW [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR767HHW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR767HHW [biosamplesummary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (61 years) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN201XKG|/analyses/ENCAN201XKG/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF051VZX|/files/ENCFF051VZX/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline was generated from a library with PBC1 value of 0.88. audit_warning: PBC2 (PCR Bottlenecking Coefficient 2, M1/M2) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where two reads map uniquely (M2). A PBC2 value in the range 0 - 1 is severe bottlenecking, 1 - 3 is moderate bottlenecking, 3 - 10 is mild bottlenecking, > 10 is no bottlenecking. PBC2 value > 10 is recommended, but > 3 is acceptable. ENCODE processed alignments file {ENCFF051VZX|/files/ENCFF051VZX/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline was generated from a library with PBC2 value of 8.49. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR767HHW | float |
Histone_ChIP-seq_ENCSR767HHW |
Histone_ChIP-seq ENCSR767HHW [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K36me3"]
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[1.67, 7.99] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF264PEI.bed.gz | 1.0 MB | 21dfbc554057f3e387f2e104cfa7f62f |
| ENCFF264PEI.bed.gz.dvc | 101.0 B | e3bb5ca60235eab56e66996592c31295 |
| ENCFF264PEI.tabix.bed.gz | 524.02 KB | 375464efeab118b8cb59cf03d6428858 |
| ENCFF264PEI.tabix.bed.gz.dvc | 106.0 B | 6a49ce438274f93134ac58d5f0576e64 |
| ENCFF264PEI.tabix.bed.gz.tbi | 126.97 KB | f3964b41cf903e393cdd5782bd633d1f |
| ENCFF264PEI.tabix.bed.gz.tbi.dvc | 110.0 B | b28dce69df7d372c0813caafe2058b3c |
| genomic_resource.yaml | 2.79 KB | 1761596047a3438ca9eaceab16da935a |
| genomic_resource_original.yaml | 2.65 KB | 6aa5bd5826a18a6e38f73a6283a966ab |
| statistics/ |