Resource

Id Histone_ChIP-seq/ENCSR764KFKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR764KFK [biosample_summary="Homo sapiens PC-3" and target="H4K20me1"]
Description
Labels
  • accession: ENCSR764KFK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002074/
  • biosample_summary: Homo sapiens PC-3
  • date_created: 2014-02-20T05:41:14.806858+00:00
  • date_released: 2016-11-09
  • doi: 10.17989/ENCSR764KFK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H4K20me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR764KFK float

Histone_ChIP-seq_ENCSR764KFK
Histone_ChIP-seq ENCSR764KFK [biosample_summary="Homo sapiens PC-3" and target="H4K20me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR764KFK [1.38, 11]
n
25,684,960
mean
3.45
sd
1.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 256849600.80% 27075
chr1 2764588 1.11% 2924
chr2 2165560 0.89% 2227
chr3 1959448 0.99% 2022
chr4 638691 0.34% 761
chr5 1280590 0.71% 1323
chr6 1088128 0.64% 1201
chr7 1189828 0.75% 1324
chr8 1605253 1.11% 1531
chr9 640382 0.46% 747
chr10 1200793 0.90% 1306
chr11 1333265 0.99% 1465
chr12 1458411 1.09% 1519
chr13 410244 0.36% 510
chr14 1161135 1.08% 1181
chr15 800528 0.78% 864
chr16 683418 0.76% 776
chr17 1473115 1.77% 1477
chr18 350953 0.44% 390
chr19 995844 1.70% 994
chr20 1102368 1.71% 1039
chr21 456367 0.98% 433
chr22 406031 0.80% 490
chrX 520020 0.33% 571
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27075 213 21251 948.66 656
global segment-length histogram

Files

Filename Size md5
ENCFF867SXF.bed.gz 652.4 KB 524ca3ae40461bc9973b38f2732b3268
ENCFF867SXF.tabix.bed.gz 290.95 KB 382413d13a9a977686a95d4ae364b492
ENCFF867SXF.tabix.bed.gz.tbi 83.56 KB 5dcf7037a8882317ac2d9e6bfe8d5bee
genomic_resource.yaml 1.59 KB 787a50d0d9fab4731591073ffb43ac22
statistics/