Resource

Id Histone_ChIP-seq/ENCSR762ZLMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR762ZLM [biosample_summary="Homo sapiens thymus tissue male child (3 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR762ZLM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002370/
  • biosample_summary: Homo sapiens thymus tissue male child (3 years)
  • date_created: 2015-10-01T07:16:04.153078+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR762ZLM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR762ZLM float

Histone_ChIP-seq_ENCSR762ZLM
Histone_ChIP-seq ENCSR762ZLM [biosample_summary="Homo sapiens thymus tissue male child (3 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR762ZLM [1.88, 17.5]
n
38,387,873
mean
6.2
sd
2.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 383878731.19% 66795
chr1 3810015 1.53% 6530
chr2 3224502 1.33% 5521
chr3 2422543 1.22% 4416
chr4 1267803 0.67% 2356
chr5 1676205 0.92% 3003
chr6 2138715 1.25% 3951
chr7 1605373 1.01% 2950
chr8 1399453 0.96% 2580
chr9 1621217 1.17% 2760
chr10 1955152 1.46% 3315
chr11 1973762 1.46% 3301
chr12 1958190 1.47% 3440
chr13 801713 0.70% 1491
chr14 1473071 1.38% 2557
chr15 1393374 1.37% 2353
chr16 1690163 1.87% 2771
chr17 2370369 2.85% 3863
chr17_GL000205v2_random 1071 0.58% 2
chr18 701790 0.87% 1270
chr19 1659274 2.83% 2888
chr20 1094217 1.70% 1846
chr21 608634 1.30% 972
chr22 1090868 2.15% 1751
chrUn_GL000219v1 523 0.29% 1
chrX 429436 0.28% 861
chrY 20440 0.04% 46
3340 contigs with no values (128712296 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66795 175 10078 574.71 448
global segment-length histogram

Files

Filename Size md5
ENCFF969YLX.bed.gz 1.24 MB 184c69588222a393c2081b0e4d1e931b
ENCFF969YLX.tabix.bed.gz 649.1 KB 25610ec61b1f22b38071dce39a0f7d88
ENCFF969YLX.tabix.bed.gz.tbi 200.9 KB 432088cd934d877b5573d4b05a50b098
genomic_resource.yaml 1.96 KB cb962088f1dc70a405018899a8f79f22
statistics/