Resource

Id Histone_ChIP-seq/ENCSR761LTBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR761LTB [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR761LTB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (41 years)
  • date_created: 2022-02-02T13:42:34.303415+00:00
  • date_released: 2022-03-28
  • doi: 10.17989/ENCSR761LTB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR761LTB float

Histone_ChIP-seq_ENCSR761LTB
Histone_ChIP-seq ENCSR761LTB [biosample_summary="Homo sapiens spleen tissue female adult (41 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR761LTB [1.71, 11.9]
n
60,008,876
mean
4.4
sd
1.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 600088761.87% 62261
chr1 6094496 2.45% 6210
chr2 4619632 1.91% 4838
chr3 3583123 1.81% 3795
chr4 1934374 1.02% 2086
chr5 2784664 1.53% 2943
chr6 3339614 1.96% 3634
chr7 2601153 1.63% 2871
chr8 2311210 1.59% 2449
chr9 2555188 1.85% 2618
chr10 2925763 2.19% 3076
chr11 3376849 2.50% 3306
chr12 3063209 2.30% 3077
chr13 1148288 1.00% 1268
chr14 2204017 2.06% 2296
chr15 2260544 2.22% 2238
chr16 2636553 2.92% 2645
chr17 3802597 4.57% 3838
chr18 898603 1.12% 975
chr19 3124143 5.33% 3091
chr20 1899956 2.95% 1953
chr21 642127 1.37% 681
chr22 1615438 3.18% 1623
chrX 587335 0.38% 750
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 62261 225 15141 963.83 746
global segment-length histogram

Files

Filename Size md5
ENCFF767GRF.bed.gz 1.17 MB 836780e6103354f059877dbb26289060
ENCFF767GRF.tabix.bed.gz 617.13 KB 09627bbe79ee3d1758db6e169669e173
ENCFF767GRF.tabix.bed.gz.tbi 203.1 KB fc52394c9d65985a46130509cfc61b5c
genomic_resource.yaml 1.98 KB 640fd53caf2a301c0ebf5f6978c46c7a
statistics/