Resource

Id Histone_ChIP-seq/ENCSR761AKFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR761AKF [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR761AKF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004222/
  • biosample_summary: Homo sapiens stomach smooth muscle tissue female adult (84 years)
  • date_created: 2015-09-15T19:52:35.492171+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR761AKF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR761AKF float

Histone_ChIP-seq_ENCSR761AKF
Histone_ChIP-seq ENCSR761AKF [biosample_summary="Homo sapiens stomach smooth muscle tissue female adult (84 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR761AKF [1.6, 50.3]
n
31,030,102
mean
9.81
sd
6.05

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 310301020.96% 51699
chr1 3326393 1.34% 5527
chr2 2232432 0.92% 3662
chr3 1864051 0.94% 3029
chr4 1123647 0.59% 1725
chr5 1396843 0.77% 2231
chr6 1654905 0.97% 2566
chr7 1323813 0.83% 2183
chr8 1104362 0.76% 1877
chr9 1423781 1.03% 2470
chr10 1456308 1.09% 2574
chr11 1905344 1.41% 3110
chr12 1655199 1.24% 2640
chr13 610204 0.53% 1014
chr14 1094221 1.02% 1803
chr15 1069600 1.05% 1774
chr16 1212051 1.34% 2132
chr17 1832569 2.20% 3200
chr18 446304 0.56% 777
chr19 1737271 2.96% 2862
chr20 832791 1.29% 1480
chr21 280582 0.60% 503
chr22 788295 1.55% 1371
chrM 247 1.49% 1
chrX 658278 0.42% 1186
chrY 611 <0.01% 2
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51699 170 8571 600.21 409
global segment-length histogram

Files

Filename Size md5
ENCFF125MMY.bed.gz 952.65 KB 013a8dcb4120d635c0730534a92d1726
ENCFF125MMY.tabix.bed.gz 490.56 KB eb5d72520a096776c47a9b284121749b
ENCFF125MMY.tabix.bed.gz.tbi 182.2 KB 25323963bbba72bef17a98248826619a
genomic_resource.yaml 1.54 KB 69f6b4fcec01e56810b9e22a32cad1c9
statistics/