Histone_ChIP-seq_ENCSR758OEC
Histone_ChIP-seq ENCSR758OEC [biosample_summary="Homo sapiens MM.1S" and target="H3K27ac"]
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| Id: | Histone_ChIP-seq/ENCSR758OEC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR758OEC [biosamplesummary="Homo sapiens MM.1S" and target="H3K27ac"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN773BPG|/analyses/ENCAN773BPG/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF014EKJ|/files/ENCFF014EKJ/} processed by ChIP-seq ENCODE3 hg19 pipeline was generated from a library with PBC1 value of 0.88. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR758OEC | float |
Histone_ChIP-seq_ENCSR758OEC |
Histone_ChIP-seq ENCSR758OEC [biosample_summary="Homo sapiens MM.1S" and target="H3K27ac"]
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[1.38, 71.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF428WVA.bed.gz | 1.11 MB | d3df58ebb0f2f23670e3cb958dbb3ec3 |
| ENCFF428WVA.bed.gz.dvc | 101.0 B | b2b9aff01335d998a8de720d2e1060c3 |
| ENCFF428WVA.tabix.bed.gz | 470.77 KB | 132e247f47724bf0b61d2877f5365928 |
| ENCFF428WVA.tabix.bed.gz.dvc | 106.0 B | c7aa580286d396fd06fd73009aef2762 |
| ENCFF428WVA.tabix.bed.gz.tbi | 208.37 KB | ee67ad35c5a6e031a84da7ed8831b888 |
| ENCFF428WVA.tabix.bed.gz.tbi.dvc | 110.0 B | 2defcf80aa03d565bf71a01609cde90e |
| genomic_resource.yaml | 2.03 KB | b6bb394bb099925af2eafa428f494ee3 |
| genomic_resource_original.yaml | 1.92 KB | e796ce9bc9a67522024986699a2e576c |
| statistics/ |