Resource

Id Histone_ChIP-seq/ENCSR754WUXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR754WUX [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR754WUX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:39.326160+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR754WUX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR754WUX float

Histone_ChIP-seq_ENCSR754WUX
Histone_ChIP-seq ENCSR754WUX [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR754WUX [1.21, 17.8]
n
178,057,702
mean
4.51
sd
2.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1780577025.53% 218966
chr1 12397009 4.98% 15436
chr1_KI270706v1_random 10137 5.79% 16
chr1_KI270707v1_random 2402 7.50% 3
chr1_KI270708v1_random 31367 24.57% 51
chr1_KI270709v1_random 19550 29.24% 21
chr1_KI270710v1_random 1572 3.91% 3
chr1_KI270712v1_random 3784 2.15% 1
chr1_KI270713v1_random 933 2.29% 2
chr1_KI270714v1_random 1648 3.95% 1
chr2 13816206 5.70% 17737
chr2_KI270716v1_random 8472 5.51% 2
chr3 11555083 5.83% 15160
chr3_GL000221v1_random 6534 4.20% 18
chr4 10027615 5.27% 13325
chr4_GL000008v2_random 10350 4.94% 12
chr5 11360105 6.26% 14211
chr5_GL000208v1_random 5276 5.69% 14
chr6 8902738 5.21% 12000
chr7 10773334 6.76% 12756
chr8 11625338 8.01% 13444
chr9 6563886 4.74% 8368
chr9_KI270719v1_random 4897 2.77% 7
chr9_KI270720v1_random 1223 3.13% 3
chr10 8602980 6.43% 10434
chr11 6923177 5.12% 8450
chr12 8091067 6.07% 9504
chr13 5711661 4.99% 7880
chr14 5264315 4.92% 6679
chr14_GL000009v2_random 7709 3.82% 18
chr14_GL000194v1_random 11670 6.09% 10
chr14_GL000225v1_random 96075 45.50% 129
chr14_KI270722v1_random 27051 13.94% 49
chr14_KI270723v1_random 5032 13.20% 6
chr14_KI270724v1_random 5085 12.86% 8
chr14_KI270725v1_random 6065 3.51% 9
chr15 4727506 4.64% 5918
chr15_KI270727v1_random 511 0.11% 2
chr16 4312609 4.77% 4870
chr16_KI270728v1_random 57935 3.09% 69
chr17 3800985 4.57% 4374
chr17_GL000205v2_random 9562 5.15% 16
chr17_KI270729v1_random 209903 74.74% 22
chr17_KI270730v1_random 32064 28.49% 17
chr18 4088004 5.09% 5369
chr19 8881939 15.15% 5972
chr20 3499813 5.43% 4237
chr21 2894384 6.20% 3402
chr22 1832920 3.61% 2105
chr22_KI270732v1_random 4572 11.01% 6
chr22_KI270733v1_random 15783 8.78% 33
chr22_KI270735v1_random 6689 15.62% 5
chr22_KI270736v1_random 129670 71.28% 39
chr22_KI270737v1_random 71418 68.78% 24
chr22_KI270738v1_random 61184 61.57% 10
chrUn_GL000195v1 2309 1.26% 4
chrUn_GL000213v1 1203 0.73% 2
chrUn_GL000214v1 8579 6.23% 14
chrUn_GL000216v2 112893 63.92% 46
chrUn_GL000218v1 2064 1.28% 5
chrUn_GL000219v1 15212 8.49% 17
chrUn_GL000220v1 4056 2.51% 10
chrUn_GL000224v1 96610 53.76% 87
chrUn_KI270304v1 613 28.31% 1
chrUn_KI270310v1 382 31.81% 1
chrUn_KI270311v1 272 2.19% 1
chrUn_KI270315v1 250 10.98% 1
chrUn_KI270320v1 674 15.26% 2
chrUn_KI270322v1 1088 5.07% 3
chrUn_KI270330v1 304 18.40% 1
chrUn_KI270333v1 768 28.45% 3
chrUn_KI270337v1 889 79.30% 2
chrUn_KI270340v1 350 24.51% 1
chrUn_KI270364v1 258 9.04% 1
chrUn_KI270376v1 435 38.29% 1
chrUn_KI270420v1 497 21.41% 1
chrUn_KI270435v1 29906 32.16% 46
chrUn_KI270438v1 75413 67.03% 24
chrUn_KI270442v1 145274 37.05% 86
chrUn_KI270448v1 1229 15.38% 3
chrUn_KI270465v1 1172 66.07% 3
chrUn_KI270468v1 1498 36.94% 2
chrUn_KI270507v1 742 13.86% 2
chrUn_KI270508v1 1446 74.12% 3
chrUn_KI270509v1 1646 71.01% 3
chrUn_KI270510v1 1227 50.81% 2
chrUn_KI270511v1 381 4.69% 1
chrUn_KI270512v1 11944 52.64% 14
chrUn_KI270515v1 2284 35.91% 4
chrUn_KI270516v1 414 31.85% 1
chrUn_KI270517v1 2397 73.69% 5
chrUn_KI270518v1 1232 56.36% 2
chrUn_KI270519v1 57075 41.32% 49
chrUn_KI270521v1 347 4.54% 1
chrUn_KI270522v1 896 15.79% 2
chrUn_KI270529v1 914 48.13% 2
chrUn_KI270538v1 2555 2.80% 7
chrUn_KI270579v1 305 0.98% 1
chrUn_KI270580v1 1336 86.03% 1
chrUn_KI270581v1 250 3.55% 1
chrUn_KI270582v1 501 7.70% 1
chrUn_KI270583v1 617 44.07% 1
chrUn_KI270584v1 4254 94.26% 2
chrUn_KI270588v1 3740 60.73% 5
chrUn_KI270589v1 6013 13.52% 9
chrUn_KI270590v1 3754 80.13% 3
chrUn_KI270591v1 1344 23.19% 2
chrUn_KI270741v1 4673 2.97% 7
chrUn_KI270742v1 4543 2.43% 13
chrUn_KI270743v1 4962 2.36% 10
chrUn_KI270744v1 15788 9.37% 19
chrUn_KI270746v1 580 0.87% 1
chrUn_KI270747v1 5399 2.72% 9
chrUn_KI270748v1 255 0.27% 1
chrUn_KI270749v1 4743 2.99% 7
chrUn_KI270750v1 885 0.59% 1
chrUn_KI270751v1 10354 6.87% 18
chrUn_KI270753v1 6012 9.55% 12
chrUn_KI270754v1 15337 38.16% 20
chrUn_KI270755v1 329 0.90% 1
chrUn_KI270756v1 78022 98.03% 9
chrUn_KI270757v1 15285 21.45% 20
chrX 10520514 6.74% 15687
chrY 239412 0.42% 382
3243 contigs with no values (118694684 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 218966 250 57329 813.18 466
global segment-length histogram

Files

Filename Size md5
ENCFF769DCP.bed.gz 4.28 MB 43670e7ab3546135be07f57997479e02
ENCFF769DCP.tabix.bed.gz 2.1 MB 559f6efb79ad84c5df0a4e1a0e61a88a
ENCFF769DCP.tabix.bed.gz.tbi 516.18 KB bf8c338a060277198681d7745a0791ff
genomic_resource.yaml 3.12 KB 08ebfb5184229cf352f50068f56f0a9b
statistics/