Resource

Id Histone_ChIP-seq/ENCSR749ANRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR749ANR [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR749ANR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (56 years)
  • date_created: 2015-09-15T19:51:46.163511+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR749ANR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR749ANR float

Histone_ChIP-seq_ENCSR749ANR
Histone_ChIP-seq ENCSR749ANR [biosample_summary="Homo sapiens colonic mucosa tissue female adult (56 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR749ANR [1.99, 10.3]
n
3,856,469
mean
4.57
sd
0.993

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 38564690.12% 7125
chr1 74985 0.03% 150
chr2 147980 0.06% 291
chr3 121147 0.06% 246
chr4 194961 0.10% 391
chr4_GL000008v2_random 3992 1.90% 3
chr5 261903 0.14% 520
chr5_GL000208v1_random 301 0.32% 1
chr6 104398 0.06% 214
chr7 205540 0.13% 399
chr8 218208 0.15% 412
chr9 76557 0.06% 148
chr9_KI270720v1_random 874 2.24% 1
chr10 137888 0.10% 269
chr11 107278 0.08% 233
chr12 156171 0.12% 270
chr13 213407 0.19% 421
chr14 123677 0.12% 249
chr14_GL000225v1_random 21427 10.15% 33
chr14_KI270722v1_random 4005 2.06% 7
chr15 189186 0.19% 312
chr16 146703 0.16% 270
chr17 50035 0.06% 97
chr17_GL000205v2_random 737 0.40% 1
chr17_KI270729v1_random 14457 5.15% 19
chr17_KI270730v1_random 5578 4.96% 9
chr18 120130 0.15% 255
chr19 565839 0.97% 853
chr20 90339 0.14% 170
chr21 211320 0.45% 374
chr22 15716 0.03% 32
chr22_KI270733v1_random 455 0.25% 1
chr22_KI270735v1_random 930 2.17% 1
chr22_KI270736v1_random 26953 14.82% 31
chr22_KI270738v1_random 297 0.30% 1
chrUn_GL000214v1 250 0.18% 1
chrUn_GL000216v2 11593 6.56% 17
chrUn_GL000219v1 1202 0.67% 2
chrUn_GL000224v1 3222 1.79% 5
chrUn_KI270438v1 4935 4.39% 7
chrUn_KI270442v1 40563 10.35% 42
chrUn_KI270519v1 2135 1.55% 2
chrUn_KI270589v1 2342 5.27% 2
chrUn_KI270591v1 948 16.36% 1
chrUn_KI270744v1 1226 0.73% 2
chrUn_KI270751v1 898 0.60% 1
chrUn_KI270756v1 676 0.85% 2
chrUn_KI270757v1 1902 2.67% 1
chrX 160494 0.10% 342
chrY 10709 0.02% 14
3317 contigs with no values (125411321 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7125 245 4331 541.26 469
global segment-length histogram

Files

Filename Size md5
ENCFF796KXG.bed.gz 128.41 KB a38014d3463a04d94924fdc13fe720dc
ENCFF796KXG.tabix.bed.gz 70.25 KB 793a4357d42c585a723573f64a36acc9
ENCFF796KXG.tabix.bed.gz.tbi 54.58 KB c6917d83ab64ff99eee9d1612a1c7a06
genomic_resource.yaml 2.01 KB 5a6066182146dc9999fc65eec539c642
statistics/