Resource

Id Histone_ChIP-seq/ENCSR747ZAIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR747ZAI [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR747ZAI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:09.884521+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR747ZAI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR747ZAI float

Histone_ChIP-seq_ENCSR747ZAI
Histone_ChIP-seq ENCSR747ZAI [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR747ZAI [1.61, 27.3]
n
253,725,486
mean
8.49
sd
4.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2537254867.89% 155597
chr1 23582067 9.47% 14357
chr2 19682981 8.13% 12172
chr3 13783818 6.95% 9224
chr4 9195463 4.83% 6169
chr5 12287758 6.77% 7754
chr6 12447176 7.29% 8168
chr7 12361778 7.76% 7985
chr8 11733761 8.08% 7282
chr9 11368906 8.21% 6716
chr10 13428516 10.04% 8110
chr11 12593528 9.32% 7517
chr12 11489297 8.62% 7182
chr13 5684777 4.97% 3937
chr14 8406761 7.85% 4935
chr15 8244428 8.08% 5081
chr16 11272349 12.48% 6287
chr17 14538918 17.46% 7887
chr18 5266393 6.55% 3402
chr19 11004715 18.77% 6564
chr20 9137035 14.18% 5210
chr21 3489443 7.47% 2028
chr22 7998551 15.74% 4026
chrX 4727067 3.03% 3604
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 155597 225 53121 1630.66 1066
global segment-length histogram

Files

Filename Size md5
ENCFF950KHU.bed.gz 3.87 MB ebbcf34d90a17ad9d3dce7b556b9cedf
ENCFF950KHU.tabix.bed.gz 1.65 MB 56e1cc6ec215accc20227ba35b80352a
ENCFF950KHU.tabix.bed.gz.tbi 368.38 KB dfe0238a9db2112dcc446a3c10aedb84
genomic_resource.yaml 2.31 KB 23efd32a133e8371fe4802b12dfe0f2b
statistics/