Resource

Id Histone_ChIP-seq/ENCSR741FIAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR741FIA [biosample_summary="Homo sapiens H9" and target="H2BK5ac"]
Description
Labels
  • accession: ENCSR741FIA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003045/
  • biosample_summary: Homo sapiens H9
  • date_created: 2015-10-01T07:16:30.769760+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR741FIA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2BK5ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR741FIA float

Histone_ChIP-seq_ENCSR741FIA

Histone_ChIP-seq ENCSR741FIA [biosample_summary="Homo sapiens H9" and target="H2BK5ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR741FIA [1.71, 19.1]
n
2,439,729
mean
3.86
sd
1.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 24397290.08% 7124
chr1 249969 0.10% 708
chr2 173521 0.07% 508
chr3 141049 0.07% 433
chr4 132365 0.07% 390
chr5 131920 0.07% 383
chr6 178859 0.10% 508
chr7 137581 0.09% 402
chr8 93887 0.06% 283
chr9 81538 0.06% 248
chr10 96727 0.07% 284
chr11 102303 0.08% 292
chr12 129030 0.10% 372
chr13 54558 0.05% 166
chr14 83475 0.08% 246
chr15 70308 0.07% 196
chr16 68603 0.08% 211
chr17 97573 0.12% 288
chr18 58062 0.07% 169
chr19 104556 0.18% 312
chr20 62271 0.10% 171
chr21 21638 0.05% 74
chr22 54006 0.11% 149
chrX 115930 0.07% 331
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7124 193 1914 342.47 293
global segment-length histogram

Files

Filename Size md5
ENCFF178SVE.bed.gz 153.0 KB 4314bef663c81df56af0fb5160d3eeff
ENCFF178SVE.tabix.bed.gz 75.91 KB f925753769878b456e09624185401bd5
ENCFF178SVE.tabix.bed.gz.tbi 60.01 KB 5a85efb0ba6a6d2c77341a2c7b6a7c3b
genomic_resource.yaml 1.58 KB 0b5c55f96df836a5c7657266ba47ff1d
statistics/