Resource

Id Histone_ChIP-seq/ENCSR738SXDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR738SXD [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR738SXD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (53 years)
  • date_created: 2016-10-19T23:09:29.850915+00:00
  • date_released: 2016-11-10
  • doi: 10.17989/ENCSR738SXD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR738SXD float

Histone_ChIP-seq_ENCSR738SXD
Histone_ChIP-seq ENCSR738SXD [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR738SXD [1.65, 77.3]
n
106,592,875
mean
11.8
sd
9.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1065928753.31% 70789
chr1 10704317 4.30% 6896
chr1_KI270713v1_random 800 1.96% 1
chr2 8070515 3.33% 5511
chr3 6977623 3.52% 4690
chr4 3802854 2.00% 2863
chr5 5116177 2.82% 3508
chr6 5660895 3.31% 3935
chr7 4794978 3.01% 3395
chr8 3951513 2.72% 2894
chr9 4706615 3.40% 3132
chr10 5305048 3.96% 3451
chr11 5796373 4.29% 3667
chr12 5594950 4.20% 3585
chr13 2358386 2.06% 1760
chr14 3452493 3.23% 2265
chr15 3790696 3.72% 2451
chr16 4111117 4.55% 2662
chr17 6391314 7.68% 3823
chr17_GL000205v2_random 1495 0.81% 2
chr18 1771980 2.20% 1333
chr19 5077651 8.66% 2973
chr20 3185868 4.94% 2000
chr21 1204683 2.58% 861
chr22 2901145 5.71% 1723
chrUn_GL000219v1 1976 1.10% 2
chrUn_KI270742v1 528 0.28% 1
chrX 1860885 1.19% 1405
3339 contigs with no values (185712227 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70789 240 48023 1505.78 1004
global segment-length histogram

Files

Filename Size md5
ENCFF963YDV.bed.gz 1.59 MB 4230d35b4d3e81077cfc2cd85e07f083
ENCFF963YDV.tabix.bed.gz 756.67 KB 25898c348c690f465f63a06ac3469d9c
ENCFF963YDV.tabix.bed.gz.tbi 219.67 KB 82706045f2fde9e550348f201e86e188
genomic_resource.yaml 1.55 KB a92adc8017292aab2a9be8509097bbf0
statistics/