Resource

Id Histone_ChIP-seq/ENCSR737NLJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR737NLJ [biosample_summary="Homo sapiens sigmoid colon tissue male adult (34 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR737NLJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male adult (34 years)
  • date_created: 2015-10-01T07:17:30.928909+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR737NLJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR737NLJ float

Histone_ChIP-seq_ENCSR737NLJ
Histone_ChIP-seq ENCSR737NLJ [biosample_summary="Homo sapiens sigmoid colon tissue male adult (34 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR737NLJ [1.82, 44.9]
n
14,659,900
mean
5.31
sd
2.14

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 146599000.46% 43762
chr1 748045 0.30% 2354
chr2 816607 0.34% 2703
chr3 721326 0.36% 2387
chr4 844701 0.44% 2758
chr5 960123 0.53% 2938
chr6 597723 0.35% 2052
chr7 924989 0.58% 2849
chr8 754859 0.52% 2487
chr9 464092 0.34% 1429
chr10 569816 0.43% 1763
chr11 529403 0.39% 1813
chr12 761989 0.57% 2100
chr13 468534 0.41% 1644
chr14 374068 0.35% 1328
chr15 433577 0.43% 1212
chr16 448993 0.50% 1257
chr17 297568 0.36% 816
chr18 262568 0.33% 923
chr19 2589743 4.42% 5443
chr20 241002 0.37% 700
chr21 287124 0.61% 869
chr22 152349 0.30% 430
chrX 303775 0.19% 1175
chrY 106926 0.19% 332
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43762 145 12349 334.99 262
global segment-length histogram

Files

Filename Size md5
ENCFF416DSY.bed.gz 765.38 KB c21aaf00ad47e7385dcfcea63d8de0a8
ENCFF416DSY.tabix.bed.gz 399.42 KB 8c8f95da72c9b6f053bbc7aa9459414b
ENCFF416DSY.tabix.bed.gz.tbi 209.46 KB f99f4e74ed52ad967411c1cb168dd49c
genomic_resource.yaml 2.21 KB f3c39cc853d841be516a5a7ca3e4ca55
statistics/