Resource

Id Histone_ChIP-seq/ENCSR736ALUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR736ALU [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR736ALU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (53 years)
  • date_created: 2016-10-19T23:02:07.769930+00:00
  • date_released: 2016-11-04
  • doi: 10.17989/ENCSR736ALU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR736ALU float

Histone_ChIP-seq_ENCSR736ALU
Histone_ChIP-seq ENCSR736ALU [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR736ALU [1.21, 65.9]
n
131,775,006
mean
15.8
sd
11.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1317750064.10% 74204
chr1 13913536 5.59% 7278
chr2 10195292 4.21% 5862
chr3 8946867 4.51% 5046
chr4 4955817 2.61% 2898
chr5 6642415 3.66% 3842
chr6 8125710 4.76% 4542
chr7 6033331 3.79% 3617
chr8 5239448 3.61% 2998
chr9 5410947 3.91% 3212
chr10 7334504 5.48% 3920
chr11 6182784 4.58% 3504
chr12 6293581 4.72% 3518
chr13 2782921 2.43% 1832
chr14 4231098 3.95% 2485
chr15 4593468 4.50% 2597
chr16 4977281 5.51% 2795
chr17 7276008 8.74% 3799
chr18 2344864 2.92% 1429
chr19 5253538 8.96% 2616
chr20 3498429 5.43% 1916
chr21 1452251 3.11% 934
chr22 3395437 6.68% 1794
chrM 688 4.15% 2
chrX 2694791 1.73% 1768
3342 contigs with no values (186287931 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74204 215 148354 1775.85 964
global segment-length histogram

Files

Filename Size md5
ENCFF090ODW.bed.gz 1.87 MB 6fea3a72398bc37f0a36cf01bed5a999
ENCFF090ODW.tabix.bed.gz 825.72 KB d6f16acad76b2ef05658f223fe743c81
ENCFF090ODW.tabix.bed.gz.tbi 214.79 KB 23804967f30502506d3006d581c4d660
genomic_resource.yaml 1.54 KB eb43e15f3bad95f47ff2d1ce04c10159
statistics/