Resource

Id Histone_ChIP-seq/ENCSR735VKOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR735VKO [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR735VKO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue male adult (54 years)
  • date_created: 2017-12-06T21:06:00.269098+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR735VKO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR735VKO float

Histone_ChIP-seq_ENCSR735VKO

Histone_ChIP-seq ENCSR735VKO [biosample_summary="Homo sapiens Peyer''s patch tissue male adult (54 years)" and target="H3K27me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR735VKO [1.73, 3.47]
n
103,377
mean
2.61
sd
0.284

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 103377<0.01% 268
chr1 11849 <0.01% 30
chr2 8385 <0.01% 21
chr3 5339 <0.01% 14
chr4 6079 <0.01% 17
chr5 5956 <0.01% 16
chr6 11316 0.01% 25
chr7 6818 <0.01% 16
chr8 2996 <0.01% 9
chr9 2510 <0.01% 8
chr10 10011 0.01% 26
chr11 3482 <0.01% 9
chr12 3263 <0.01% 9
chr13 4884 <0.01% 14
chr14 3611 <0.01% 10
chr15 1607 <0.01% 4
chr16 2789 <0.01% 7
chr17 6806 0.01% 16
chr18 1402 <0.01% 4
chr19 2235 <0.01% 7
chr20 889 <0.01% 3
chr21 374 <0.01% 1
chr22 776 <0.01% 2
3344 contigs with no values (342345395 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 268 225 1027 385.74 349
global segment-length histogram

Files

Filename Size md5
ENCFF670OQU.bed.gz 5.5 KB e88302d80545a964ba110d7529ef6e98
ENCFF670OQU.tabix.bed.gz 2.98 KB 8f0e205163f742de889de6c3751afbc5
ENCFF670OQU.tabix.bed.gz.tbi 6.86 KB 0e2c1dada31a06f49d1fd26e9b1a7a9c
genomic_resource.yaml 1.73 KB 2a0bfa6ea730af2e8f261aac1c94645f
statistics/