Resource

Id Histone_ChIP-seq/ENCSR734NCKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR734NCK [biosample_summary="Homo sapiens H9" and target="H2BK15ac"]
Description
Labels
  • accession: ENCSR734NCK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003045/
  • biosample_summary: Homo sapiens H9
  • date_created: 2015-10-01T07:16:29.382308+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR734NCK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2BK15ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR734NCK float

Histone_ChIP-seq_ENCSR734NCK

Histone_ChIP-seq ENCSR734NCK [biosample_summary="Homo sapiens H9" and target="H2BK15ac"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR734NCK [1.49, 6.41]
n
1,003,614
mean
3.42
sd
0.565

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 10036140.03% 5414
chr1 85891 0.03% 469
chr1_KI270712v1_random 187 0.11% 1
chr2 74557 0.03% 406
chr3 61937 0.03% 328
chr4 41866 0.02% 228
chr4_GL000008v2_random 450 0.21% 2
chr5 50502 0.03% 276
chr6 55871 0.03% 310
chr7 53144 0.03% 286
chr8 43782 0.03% 238
chr9 45227 0.03% 244
chr10 47145 0.04% 260
chr11 45512 0.03% 240
chr12 44619 0.03% 237
chr13 21376 0.02% 121
chr14 33267 0.03% 175
chr15 32012 0.03% 175
chr16 43190 0.05% 233
chr17 51027 0.06% 277
chr17_GL000205v2_random 387 0.21% 2
chr17_KI270730v1_random 146 0.13% 1
chr18 24410 0.03% 136
chr19 51702 0.09% 259
chr20 25179 0.04% 136
chr21 14214 0.03% 77
chr22 26521 0.05% 135
chr22_KI270733v1_random 1022 0.57% 4
chrUn_GL000220v1 143 0.09% 1
chrX 28173 0.02% 156
chrY 155 <0.01% 1
3336 contigs with no values (128051617 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 5414 140 579 185.37 170
global segment-length histogram

Files

Filename Size md5
ENCFF264SLU.bed.gz 101.53 KB 16612a59d993c554cd1aff49b2310110
ENCFF264SLU.tabix.bed.gz 56.1 KB 64f316cb5c03ab68e0c9dc8dcada6cd1
ENCFF264SLU.tabix.bed.gz.tbi 54.9 KB ed56ed09aa40c6f6451c052703a72d20
genomic_resource.yaml 1.85 KB 7f3a5d6cbe2fb6e41c466d7c0861c636
statistics/