Resource

Id Histone_ChIP-seq/ENCSR731JZNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR731JZN [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (50 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR731JZN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003346/
  • biosample_summary: Homo sapiens mucosa of rectum tissue female adult (50 years)
  • date_created: 2016-03-03T19:37:48.251617+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR731JZN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (50 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR731JZN float

Histone_ChIP-seq_ENCSR731JZN
Histone_ChIP-seq ENCSR731JZN [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (50 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR731JZN [1.91, 13.6]
n
17,226,795
mean
5.12
sd
1.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 172267950.54% 40719
chr1 1674410 0.67% 3918
chr2 1198593 0.49% 2628
chr3 707606 0.36% 1680
chr4 539769 0.28% 1127
chr5 880014 0.48% 1965
chr6 1033158 0.60% 2224
chr7 721498 0.45% 1614
chr8 591493 0.41% 1397
chr9 775659 0.56% 1727
chr10 876844 0.66% 1944
chr11 909376 0.67% 2129
chr12 848707 0.64% 1860
chr13 349723 0.31% 779
chr14 481030 0.45% 1128
chr15 530526 0.52% 1230
chr16 492627 0.55% 1245
chr17 1062341 1.28% 2467
chr18 246195 0.31% 618
chr19 746002 1.27% 1826
chr20 673152 1.04% 1675
chr21 191852 0.41% 484
chr22 373452 0.73% 972
chrX 1322768 0.85% 4082
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40719 140 6126 423.07 325
global segment-length histogram

Files

Filename Size md5
ENCFF171OYG.bed.gz 698.54 KB a43f06cdbd8879e03c87984099f822d8
ENCFF171OYG.tabix.bed.gz 369.76 KB 546748f54060f3606c7cf6cfe16e812f
ENCFF171OYG.tabix.bed.gz.tbi 142.42 KB 5f24a2341ae1bb1672cf24be9cfc6fd7
genomic_resource.yaml 2.03 KB ce6272144757f1669f65c35204de05db
statistics/