Resource

Id Histone_ChIP-seq/ENCSR730POXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR730POX [biosample_summary="Homo sapiens H9" and target="H3K4me2"]
Description
Labels
  • accession: ENCSR730POX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003045/
  • biosample_summary: Homo sapiens H9
  • date_created: 2015-10-01T07:17:15.394239+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR730POX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR730POX float

Histone_ChIP-seq_ENCSR730POX
Histone_ChIP-seq ENCSR730POX [biosample_summary="Homo sapiens H9" and target="H3K4me2"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR730POX [1.83, 36.4]
n
52,390,764
mean
9.78
sd
4.74

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 523907641.63% 42506
chr1 5145932 2.07% 4093
chr2 3641461 1.50% 3007
chr3 2926577 1.48% 2376
chr4 2188630 1.15% 1792
chr5 2642396 1.46% 2071
chr6 3249590 1.90% 2438
chr7 2531203 1.59% 2163
chr8 2033331 1.40% 1676
chr9 2091565 1.51% 1735
chr10 2201888 1.65% 1788
chr11 2808051 2.08% 2207
chr12 2729224 2.05% 2125
chr13 1139464 1.00% 960
chr14 1716383 1.60% 1353
chr15 1691722 1.66% 1358
chr16 1928074 2.13% 1613
chr17 2779637 3.34% 2213
chr18 954169 1.19% 816
chr19 3074230 5.24% 2496
chr20 1384716 2.15% 1212
chr21 485962 1.04% 424
chr22 1025871 2.02% 893
chrX 2020688 1.29% 1697
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42506 253 16752 1232.55 985
global segment-length histogram

Files

Filename Size md5
ENCFF348AXR.bed.gz 1.1 MB c49e0ee104f3bc1021195d2f0894abca
ENCFF348AXR.tabix.bed.gz 479.71 KB b06529331f069c25053ee6b7a5601561
ENCFF348AXR.tabix.bed.gz.tbi 209.52 KB 5d0957d40dbd04d5e717ef9cc5979682
genomic_resource.yaml 2.09 KB 8dfbbbc1b7e94970c7f1819ef32edaa2
statistics/