type: position_score
table:
  filename: ENCFF560UTN.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR726ZZX
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR726ZZX [biosample_summary="Homo sapiens ACC112" and target="H3K4me1"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR726ZZX [biosample_summary="Homo sapiens ACC112" and target="H3K4me1"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1\n\n**summary**:\
    \ \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\_action**:\
    \ Archived analysis {ENCAN488XTR|/analyses/ENCAN488XTR/} has in progress subobject\
    \ quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF420ANX|/files/ENCFF420ANX/}\
    \ processed by ChIP-seq ENCODE3 GRCh38 pipeline has 31908766 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K4me1-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR726ZZX
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens ACC112
    replication_type: unreplicated
    biosample_ontology: /biosample-types/cell_line_EFO_0007070/
    perturbed: false
    doi: 10.17989/ENCSR726ZZX
    date_created: '2014-02-20T05:42:43.973994+00:00'
    date_released: '2016-10-28'
    submitter_comment: This experiment is unreplicated due to limited biosamples.
    target: H3K4me1
