Resource

Id Histone_ChIP-seq/ENCSR726LZGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR726LZG [biosample_summary="Homo sapiens PC-9" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR726LZG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002847/
  • biosample_summary: Homo sapiens PC-9
  • date_created: 2014-10-24T16:25:39.717157+00:00
  • date_released: 2016-05-06
  • doi: 10.17989/ENCSR726LZG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR726LZG float

Histone_ChIP-seq_ENCSR726LZG
Histone_ChIP-seq ENCSR726LZG [biosample_summary="Homo sapiens PC-9" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR726LZG [1.39, 9.97]
n
158,984,081
mean
4.18
sd
1.25

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1589840814.94% 124421
chr1 11568430 4.65% 9940
chr1_KI270706v1_random 383 0.22% 1
chr2 12923573 5.34% 9873
chr3 5300767 2.67% 4998
chr4 2303160 1.21% 2341
chr5 10510223 5.79% 7501
chr5_GL000208v1_random 8878 9.58% 12
chr6 6493976 3.80% 5064
chr7 12477649 7.83% 8150
chr8 6270797 4.32% 5472
chr9 5930382 4.29% 4463
chr9_KI270719v1_random 3012 1.70% 6
chr9_KI270720v1_random 2603 6.67% 3
chr10 7166593 5.36% 7124
chr11 9924628 7.35% 7176
chr12 9220177 6.92% 6634
chr13 5017510 4.39% 3750
chr14 4423285 4.13% 3685
chr14_GL000194v1_random 4544 2.37% 6
chr14_GL000225v1_random 8736 4.14% 11
chr15 4311021 4.23% 4368
chr16 8334840 9.23% 6812
chr16_KI270728v1_random 24772 1.32% 26
chr17 7181014 8.63% 5441
chr17_GL000205v2_random 26607 14.34% 12
chr18 4735416 5.89% 3652
chr19 6842553 11.67% 4890
chr20 8457320 13.12% 5339
chr21 1320602 2.83% 1380
chr22 5312169 10.45% 3075
chr22_KI270733v1_random 6315 3.51% 5
chrM 5400 32.59% 6
chrUn_GL000214v1 208 0.15% 1
chrUn_GL000219v1 38168 21.30% 29
chrUn_GL000224v1 10820 6.02% 17
chrUn_KI270330v1 328 19.85% 1
chrUn_KI270438v1 1646 1.46% 4
chrUn_KI270442v1 30598 7.80% 37
chrUn_KI270508v1 450 23.07% 1
chrUn_KI270538v1 2776 3.04% 5
chrUn_KI270741v1 589 0.37% 1
chrUn_KI270742v1 437 0.23% 1
chrUn_KI270743v1 475 0.23% 1
chrUn_KI270744v1 3658 2.17% 3
chrUn_KI270750v1 4498 3.02% 6
chrUn_KI270754v1 909 2.26% 2
chrX 2771186 1.78% 3096
3319 contigs with no values (181155099 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 124421 205 59724 1277.79 731
global segment-length histogram

Files

Filename Size md5
ENCFF733ERZ.bed.gz 2.51 MB 066ea09d4d3e6265aa07a2285591ffe1
ENCFF733ERZ.tabix.bed.gz 1.2 MB 608ce5b2ca9a74ab9e068578ecc46d36
ENCFF733ERZ.tabix.bed.gz.tbi 169.45 KB 46cbbb76cf0d63c0c455f37c16940c30
genomic_resource.yaml 2.36 KB bed7ed338f8dccc480d2ab247c6ee577
statistics/