Resource

Id Histone_ChIP-seq/ENCSR723RUMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR723RUM [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR723RUM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:39.734296+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR723RUM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR723RUM float

Histone_ChIP-seq_ENCSR723RUM
Histone_ChIP-seq ENCSR723RUM [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR723RUM [1.67, 21.9]
n
63,143,613
mean
6.04
sd
2.64

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 631436131.96% 51079
chr1 6681084 2.68% 5249
chr2 4471710 1.85% 3648
chr3 3720133 1.88% 3072
chr4 2528784 1.33% 2143
chr5 3280888 1.81% 2699
chr6 3222912 1.89% 2565
chr7 2804755 1.76% 2449
chr8 2363707 1.63% 1992
chr9 3252337 2.35% 2541
chr10 3263867 2.44% 2498
chr11 4056122 3.00% 3105
chr12 3157216 2.37% 2651
chr13 1415238 1.24% 1190
chr14 2268148 2.12% 1779
chr15 2195920 2.15% 1738
chr16 2191297 2.43% 1756
chr17 3674249 4.41% 2876
chr18 1170718 1.46% 993
chr19 2720685 4.64% 2298
chr20 1847112 2.87% 1430
chr21 646287 1.38% 511
chr22 1511328 2.97% 1136
chrX 699116 0.45% 760
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51079 210 35993 1236.2 858
global segment-length histogram

Files

Filename Size md5
ENCFF124JXP.bed.gz 1.04 MB 7e0cb57fd0541be70b020dc9919802d9
ENCFF124JXP.tabix.bed.gz 523.9 KB ddd7e6eaa01a00bad9e474aae84e2243
ENCFF124JXP.tabix.bed.gz.tbi 186.54 KB c1aa53f01045a1d284a5bc1b5d57ebfc
genomic_resource.yaml 1.75 KB 8f631689a7fdd23a64808638106634a1
statistics/