Resource

Id Histone_ChIP-seq/ENCSR717AJDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR717AJD [biosample_summary="Homo sapiens temporal lobe tissue male adult (81 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR717AJD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001871/
  • biosample_summary: Homo sapiens temporal lobe tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:02.325510+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR717AJD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR717AJD float

Histone_ChIP-seq_ENCSR717AJD
Histone_ChIP-seq ENCSR717AJD [biosample_summary="Homo sapiens temporal lobe tissue male adult (81 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR717AJD [1.95, 66.5]
n
52,638,966
mean
18.8
sd
11.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 526389661.64% 38289
chr1 5032826 2.02% 3581
chr2 3714582 1.53% 2770
chr3 3171835 1.60% 2311
chr4 2229848 1.17% 1617
chr5 2768633 1.53% 2006
chr6 3135666 1.84% 2303
chr7 2535864 1.59% 1938
chr8 2092250 1.44% 1536
chr9 2151022 1.55% 1559
chr10 2348099 1.75% 1764
chr11 2812618 2.08% 1938
chr12 2762733 2.07% 1909
chr13 1248722 1.09% 981
chr14 1687255 1.58% 1188
chr15 1648014 1.62% 1220
chr16 1931361 2.14% 1400
chr17 2716505 3.26% 1920
chr18 1042294 1.30% 808
chr19 3220302 5.49% 2364
chr20 1315119 2.04% 952
chr21 496641 1.06% 405
chr22 1072001 2.11% 772
chrX 1456480 0.93% 1016
chrY 48296 0.08% 31
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 38289 250 13047 1374.78 1022
global segment-length histogram

Files

Filename Size md5
ENCFF107KDQ.bed.gz 899.34 KB d47d9b6a86523db57e780d128262d14b
ENCFF107KDQ.tabix.bed.gz 415.88 KB 98b43398f4d59a0f469f3950877f51d9
ENCFF107KDQ.tabix.bed.gz.tbi 204.43 KB 73f2e5ddaeda7e4ab64c3d84107a5da5
genomic_resource.yaml 2.0 KB efecc9f9bb88c995d1780556f2675e69
statistics/