Resource

Id Histone_ChIP-seq/ENCSR716TNUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR716TNU [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR716TNU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (51 years)
  • date_created: 2017-12-06T21:02:52.365220+00:00
  • date_released: 2018-12-19
  • doi: 10.17989/ENCSR716TNU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR716TNU float

Histone_ChIP-seq_ENCSR716TNU
Histone_ChIP-seq ENCSR716TNU [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR716TNU [1.52, 9.34]
n
76,147,130
mean
3.81
sd
0.973

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 761471302.37% 90594
chr1 8244253 3.31% 9431
chr2 6301754 2.60% 7586
chr3 4676635 2.36% 5890
chr4 2677974 1.41% 3800
chr5 3758133 2.07% 4706
chr6 3400610 1.99% 4372
chr7 3205146 2.01% 4056
chr8 2414145 1.66% 3222
chr9 3155545 2.28% 3735
chr10 3477357 2.60% 4157
chr11 3762428 2.79% 4266
chr12 4624586 3.47% 5127
chr13 1365841 1.19% 1991
chr14 2711480 2.53% 3275
chr15 2861379 2.81% 3585
chr16 3307184 3.66% 3654
chr17 4496982 5.40% 4817
chr18 1174181 1.46% 1632
chr19 5033154 8.59% 4805
chr20 2112006 3.28% 2492
chr21 861878 1.85% 1011
chr22 1874629 3.69% 2014
chrX 649850 0.42% 970
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90594 120 19167 840.53 578
global segment-length histogram

Files

Filename Size md5
ENCFF591SSR.bed.gz 1.84 MB 72f3e441fc088c3fd23f1f94ab7710df
ENCFF591SSR.tabix.bed.gz 916.39 KB c3a024ba3f7dfcb51b0858674cc024c5
ENCFF591SSR.tabix.bed.gz.tbi 144.92 KB 795833a296ce9a54acfc188f3bb7c136
genomic_resource.yaml 1.55 KB 3608fdf9c5533de96ec289dee84995f6
statistics/