Resource

Id Histone_ChIP-seq/ENCSR716KBLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR716KBL [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR716KBL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:15.245362+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR716KBL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 72 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR716KBL float

Histone_ChIP-seq_ENCSR716KBL
Histone_ChIP-seq ENCSR716KBL [biosample_summary="Homo sapiens BLaER1 72 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR716KBL [1.41, 27.1]
n
271,315,853
mean
7.77
sd
4.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2713158538.43% 217456
chr1 26148565 10.50% 20456
chr1_KI270711v1_random 276 0.65% 1
chr1_KI270712v1_random 310 0.18% 1
chr1_KI270713v1_random 5517 13.54% 9
chr2 21085960 8.71% 17361
chr3 16005415 8.07% 13350
chr3_GL000221v1_random 2112 1.36% 7
chr4 10907930 5.73% 9752
chr5 13863024 7.64% 11422
chr6 14389037 8.42% 11982
chr7 13501139 8.47% 11497
chr8 13160265 9.07% 10150
chr9 11559902 8.35% 9374
chr9_KI270718v1_random 616 1.62% 2
chr10 13471431 10.07% 10866
chr11 13550351 10.03% 10498
chr11_KI270721v1_random 973 0.97% 3
chr12 13347337 10.01% 10462
chr13 5904383 5.16% 5360
chr14 8607333 8.04% 6784
chr14_GL000194v1_random 867 0.45% 2
chr14_GL000225v1_random 453 0.21% 1
chr14_KI270723v1_random 1555 4.08% 3
chr14_KI270726v1_random 428 0.98% 1
chr15 9189123 9.01% 7179
chr15_KI270727v1_random 698 0.16% 1
chr16 11035473 12.22% 8075
chr16_KI270728v1_random 2235 0.12% 2
chr17 14520187 17.44% 10230
chr17_GL000205v2_random 22566 12.16% 19
chr17_KI270729v1_random 468 0.17% 1
chr18 5252156 6.53% 4499
chr19 10844128 18.50% 7800
chr20 8766047 13.60% 6597
chr21 3667827 7.85% 2930
chr22 6713131 13.21% 4966
chr22_KI270731v1_random 2141 1.42% 4
chr22_KI270733v1_random 2074 1.15% 5
chr22_KI270734v1_random 1319 0.80% 3
chr22_KI270735v1_random 1982 4.63% 3
chrUn_GL000195v1 2771 1.52% 8
chrUn_GL000214v1 663 0.48% 2
chrUn_GL000216v2 865 0.49% 2
chrUn_GL000219v1 12165 6.79% 18
chrUn_GL000220v1 659 0.41% 2
chrUn_GL000224v1 1228 0.68% 2
chrUn_KI270438v1 293 0.26% 1
chrUn_KI270442v1 688 0.18% 2
chrUn_KI270519v1 1352 0.98% 2
chrUn_KI270742v1 270 0.14% 1
chrUn_KI270744v1 7344 4.36% 7
chrUn_KI270746v1 521 0.78% 2
chrUn_KI270751v1 253 0.17% 1
chrUn_KI270753v1 3791 6.02% 3
chrUn_KI270755v1 865 2.36% 1
chrX 5743094 3.68% 5740
chrY 2297 <0.01% 4
3309 contigs with no values (122381287 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 217456 250 51138 1247.68 743
global segment-length histogram

Files

Filename Size md5
ENCFF842OPS.bed.gz 4.56 MB 4ad45d583b207dd9d6319c4891cb21f9
ENCFF842OPS.tabix.bed.gz 2.15 MB c0b8f0167734ce58a5663f1a73e443d1
ENCFF842OPS.tabix.bed.gz.tbi 435.04 KB e4f25397d80d7c1c84171d6cb5f10192
genomic_resource.yaml 3.12 KB 6d5b1bcaf5d74c7b52aec900d6562e63
statistics/