Histone_ChIP-seq_ENCSR716CWA
Histone_ChIP-seq ENCSR716CWA [biosample_summary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR716CWA |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR716CWA [biosamplesummary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN989ENI|/analyses/ENCAN989ENI/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF416GLM|/files/ENCFF416GLM/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 21855298 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed redacted alignments file {ENCFF783JQO|/files/ENCFF783JQO/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 26347729 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR716CWA | float |
Histone_ChIP-seq_ENCSR716CWA |
Histone_ChIP-seq ENCSR716CWA [biosample_summary="Homo sapiens naive thymus-derived CD4-positive, alpha-beta T cell" and target="H3K36me3"]
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[1.64, 18.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF859TBL.bed.gz | 2.67 MB | 466aa350077827c2cf76ce181bc817b5 |
| ENCFF859TBL.bed.gz.dvc | 101.0 B | 3df798a4aa658b15de6008d78bf8842e |
| ENCFF859TBL.tabix.bed.gz | 1.21 MB | 322c724b2342e885104d42aea4b4740c |
| ENCFF859TBL.tabix.bed.gz.dvc | 107.0 B | b6475f27c2088956055b3cccc80b5dec |
| ENCFF859TBL.tabix.bed.gz.tbi | 158.46 KB | 739086cf09bc22c132c13627a3586ec5 |
| ENCFF859TBL.tabix.bed.gz.tbi.dvc | 110.0 B | 4150287b218d2e6683afa025a5c07f52 |
| genomic_resource.yaml | 2.61 KB | aa02a85f2807689d9f355108eb322006 |
| genomic_resource_original.yaml | 2.46 KB | c8a340dd6955ee598b80cfedaa96683a |
| statistics/ |