Resource

Id Histone_ChIP-seq/ENCSR714FDJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR714FDJ [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR714FDJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (37 years)
  • date_created: 2018-04-26T17:28:45.892649+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR714FDJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR714FDJ float

Histone_ChIP-seq_ENCSR714FDJ
Histone_ChIP-seq ENCSR714FDJ [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR714FDJ [1.74, 13.2]
n
20,388,520
mean
4.44
sd
1.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 203885200.63% 23846
chr1 1294254 0.52% 1693
chr2 1242094 0.51% 1738
chr3 998454 0.50% 1380
chr4 1099491 0.58% 1382
chr5 1349863 0.74% 1578
chr6 838572 0.49% 1203
chr7 1192509 0.75% 1461
chr8 944451 0.65% 1268
chr9 741250 0.54% 876
chr10 856464 0.64% 1089
chr11 752852 0.56% 1034
chr12 1163674 0.87% 1307
chr13 446002 0.39% 662
chr14 507994 0.47% 719
chr15 503996 0.49% 621
chr16 610190 0.68% 704
chr17 398865 0.48% 503
chr18 356492 0.44% 473
chr19 4162635 7.10% 2899
chr20 327922 0.51% 460
chr21 280428 0.60% 354
chr22 227159 0.45% 304
chrX 79802 0.05% 113
chrY 13107 0.02% 25
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23846 180 44104 855.01 609
global segment-length histogram

Files

Filename Size md5
ENCFF357WOH.bed.gz 478.31 KB 9aa22d6fec31c9a686444aae344ec5dd
ENCFF357WOH.tabix.bed.gz 243.3 KB a42b16ce6b518429e78cde28691acc16
ENCFF357WOH.tabix.bed.gz.tbi 134.72 KB 51d9617c874190f9d50c146ab2d6f953
genomic_resource.yaml 1.75 KB 8892bce46d58a617835298641f3dd8c7
statistics/