Resource

Id Histone_ChIP-seq/ENCSR709APFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR709APF [biosample_summary="Homo sapiens spleen tissue male adult (54 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR709APF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue male adult (54 years)
  • date_created: 2017-12-06T21:07:56.463734+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR709APF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR709APF float

Histone_ChIP-seq_ENCSR709APF
Histone_ChIP-seq ENCSR709APF [biosample_summary="Homo sapiens spleen tissue male adult (54 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR709APF [1.08, 18.9]
n
220,790,206
mean
4.24
sd
2.34

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2207902066.86% 154397
chr1 13472533 5.41% 9490
chr2 17357316 7.17% 12877
chr3 14549187 7.34% 10945
chr4 16780532 8.82% 12971
chr5 16595186 9.14% 11839
chr6 13027755 7.63% 9578
chr7 15387395 9.66% 10009
chr8 12243769 8.44% 8864
chr9 7482041 5.41% 5426
chr10 9457542 7.07% 6533
chr11 10755936 7.96% 7446
chr12 10240022 7.68% 6669
chr13 8928916 7.81% 7279
chr14 6772546 6.33% 5079
chr15 5635347 5.53% 3829
chr16 7088815 7.85% 4953
chr17 3586256 4.31% 2559
chr18 5353750 6.66% 4146
chr19 12467687 21.27% 3703
chr20 3780436 5.87% 2929
chr21 3706006 7.93% 2739
chr22 1574713 3.10% 1088
chrX 3898240 2.50% 3021
chrY 648280 1.13% 425
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 154397 255 166849 1430.02 901
global segment-length histogram

Files

Filename Size md5
ENCFF778DJJ.bed.gz 3.58 MB 66598bd795f84a84e53771926ec0376c
ENCFF778DJJ.tabix.bed.gz 1.62 MB b1e6c35854dd457fd0b95685f4e36a1a
ENCFF778DJJ.tabix.bed.gz.tbi 404.94 KB c0f86e8e3630d3e1145201655b294e06
genomic_resource.yaml 1.48 KB bfeeb20430a708743d355f6ba484640d
statistics/