Resource

Id Histone_ChIP-seq/ENCSR708BMVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR708BMV [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR708BMV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)
  • date_created: 2018-05-11T18:46:13.367263+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR708BMV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR708BMV float

Histone_ChIP-seq_ENCSR708BMV
Histone_ChIP-seq ENCSR708BMV [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR708BMV [1.64, 14.8]
n
38,281,204
mean
3.72
sd
1.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 382812041.19% 39901
chr1 2466597 0.99% 2715
chr2 2425598 1.00% 2822
chr3 2073430 1.05% 2410
chr4 2097161 1.10% 2325
chr5 2539485 1.40% 2589
chr6 1732026 1.01% 2069
chr7 2100283 1.32% 2187
chr8 1766190 1.22% 2017
chr9 1341204 0.97% 1408
chr10 1613076 1.21% 1740
chr11 1704020 1.26% 1772
chr12 2070375 1.55% 2019
chr13 845115 0.74% 1061
chr14 980061 0.92% 1132
chr15 940753 0.92% 949
chr16 1253366 1.39% 1214
chr17 732032 0.88% 754
chr18 710032 0.88% 831
chr19 3905129 6.66% 2167
chr20 733085 1.14% 853
chr21 476776 1.02% 521
chr22 479239 0.94% 514
chrX 3296171 2.11% 3832
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 39901 225 49501 959.4 732
global segment-length histogram

Files

Filename Size md5
ENCFF936ENS.bed.gz 801.38 KB e0f3c1976ec614c8a2c412e408f6ac28
ENCFF936ENS.tabix.bed.gz 409.05 KB 3518509766d3c31f0614838c4fd0e226
ENCFF936ENS.tabix.bed.gz.tbi 216.13 KB a2f5f550c65f30fd652b101778bf72ae
genomic_resource.yaml 1.78 KB 76b5d40f87f87271c7abd30b1c549b87
statistics/