Resource

Id Histone_ChIP-seq/ENCSR705USKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR705USK [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR705USK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:49.444872+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR705USK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 18 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR705USK float

Histone_ChIP-seq_ENCSR705USK
Histone_ChIP-seq ENCSR705USK [biosample_summary="Homo sapiens BLaER1 18 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR705USK [1.2, 61.9]
n
50,958,369
mean
12.9
sd
10.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 509583691.58% 55364
chr1 4967906 2.00% 5315
chr1_KI270706v1_random 252 0.14% 1
chr1_KI270709v1_random 489 0.73% 1
chr1_KI270713v1_random 879 2.16% 2
chr2 3350463 1.38% 3648
chr3 2549920 1.29% 2751
chr3_GL000221v1_random 484 0.31% 1
chr4 1646897 0.87% 1760
chr5 2388441 1.32% 2422
chr6 2546797 1.49% 2631
chr7 2362021 1.48% 2650
chr8 1975257 1.36% 2246
chr9 2178657 1.57% 2461
chr9_KI270720v1_random 291 0.75% 1
chr10 2273734 1.70% 2501
chr11 2619513 1.94% 2792
chr12 2582447 1.94% 2685
chr13 999982 0.87% 1002
chr14 1688039 1.58% 1849
chr14_GL000009v2_random 421 0.21% 1
chr14_GL000194v1_random 847 0.44% 1
chr14_GL000225v1_random 808 0.38% 3
chr15 1569666 1.54% 1728
chr16 2471799 2.74% 2820
chr16_KI270728v1_random 327 0.02% 1
chr17 3469209 4.17% 3758
chr17_GL000205v2_random 8435 4.54% 7
chr18 843801 1.05% 934
chr19 3403526 5.81% 3622
chr20 1561569 2.42% 1826
chr21 687593 1.47% 796
chr22 1467102 2.89% 1777
chr22_KI270733v1_random 1460 0.81% 4
chrM 6897 41.63% 7
chrUn_GL000195v1 2056 1.12% 4
chrUn_GL000219v1 4375 2.44% 5
chrUn_GL000220v1 251 0.16% 1
chrUn_GL000224v1 490 0.27% 1
chrUn_KI270438v1 4473 3.98% 5
chrUn_KI270519v1 291 0.21% 1
chrUn_KI270744v1 1401 0.83% 3
chrUn_KI270753v1 276 0.44% 1
chrX 1318199 0.84% 1338
chrY 628 <0.01% 1
3322 contigs with no values (124555300 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 55364 250 17483 920.42 494
global segment-length histogram

Files

Filename Size md5
ENCFF820IVD.bed.gz 1.22 MB 8259fc4be50f441454b3c73865bb935a
ENCFF820IVD.tabix.bed.gz 579.71 KB 5b1aaf202884999438caceab54752a92
ENCFF820IVD.tabix.bed.gz.tbi 211.31 KB dcb6e949c85a55d90ff6506757338e33
genomic_resource.yaml 3.12 KB 58cb9c66f3c2071e88253f67e06526e0
statistics/