Resource

Id Histone_ChIP-seq/ENCSR705SZPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR705SZP [biosample_summary="Homo sapiens PC-9" and target="H3K79me2"]
Description
Labels
  • accession: ENCSR705SZP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002847/
  • biosample_summary: Homo sapiens PC-9
  • date_created: 2014-10-24T16:22:20.364441+00:00
  • date_released: 2017-01-13
  • doi: 10.17989/ENCSR705SZP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K79me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR705SZP float

Histone_ChIP-seq_ENCSR705SZP

Histone_ChIP-seq ENCSR705SZP [biosample_summary="Homo sapiens PC-9" and target="H3K79me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR705SZP [1.49, 21.3]
n
107,574,476
mean
5.92
sd
3.31

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1075744763.34% 63019
chr1 10858411 4.36% 6490
chr2 9568148 3.95% 5121
chr3 7307644 3.69% 4078
chr4 3541117 1.86% 2547
chr5 5503861 3.03% 2874
chr6 5735356 3.36% 3542
chr7 6133892 3.85% 3469
chr8 4397377 3.03% 2671
chr9 4032435 2.91% 2596
chr10 4364498 3.26% 2901
chr11 5783551 4.28% 3195
chr12 5874161 4.41% 3311
chr13 2643994 2.31% 1590
chr14 3800121 3.55% 2170
chr15 3308908 3.24% 1995
chr16 4358623 4.82% 2505
chr17 5454354 6.55% 3249
chr18 2064290 2.57% 1296
chr19 3903060 6.66% 2292
chr20 3241006 5.03% 1654
chr21 970672 2.08% 576
chr22 2697820 5.31% 1509
chrX 2031177 1.30% 1388
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63019 200 67076 1707.02 893
global segment-length histogram

Files

Filename Size md5
ENCFF292NSP.bed.gz 1.45 MB aef51139842f06298a764fe46e8bf8e4
ENCFF292NSP.tabix.bed.gz 668.45 KB 62ca9c7062dc4916d92b63938f7987a7
ENCFF292NSP.tabix.bed.gz.tbi 119.72 KB 0ab747a6798edb4ca3caa65532da9971
genomic_resource.yaml 1.87 KB 10bda960e706f6d9e02e93811ab65eaa
statistics/