Resource

Id Histone_ChIP-seq/ENCSR703KXHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR703KXH [biosample_summary="Homo sapiens H1" and target="H2AK5ac"]
Description
Labels
  • accession: ENCSR703KXH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:15:49.574505+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR703KXH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2AK5ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR703KXH float

Histone_ChIP-seq_ENCSR703KXH
Histone_ChIP-seq ENCSR703KXH [biosample_summary="Homo sapiens H1" and target="H2AK5ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR703KXH [1.71, 25.4]
n
23,767,239
mean
4.41
sd
1.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 237672390.74% 58496
chr1 2477030 0.99% 5891
chr2 1656618 0.68% 4114
chr3 1218254 0.61% 3092
chr4 782749 0.41% 2025
chr5 1111920 0.61% 2763
chr6 1225084 0.72% 3077
chr7 1230951 0.77% 3070
chr8 932712 0.64% 2348
chr9 1041282 0.75% 2542
chr10 1239706 0.93% 3042
chr11 1399905 1.04% 3368
chr12 1174277 0.88% 2899
chr13 481051 0.42% 1237
chr14 732076 0.68% 1771
chr15 768111 0.75% 1855
chr16 1081439 1.20% 2671
chr17 1412413 1.70% 3420
chr18 475700 0.59% 1182
chr19 1089552 1.86% 2705
chr20 793721 1.23% 1947
chr21 327788 0.70% 793
chr22 826559 1.63% 1934
chrX 279375 0.18% 725
chrY 8966 0.02% 25
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58496 173 4366 406.31 342
global segment-length histogram

Files

Filename Size md5
ENCFF320JIP.bed.gz 1.16 MB c7adbb2feb36db37aec4120409073480
ENCFF320JIP.tabix.bed.gz 580.08 KB 3f994a98562178e662941cde442571c0
ENCFF320JIP.tabix.bed.gz.tbi 238.47 KB 5d52d0e1f24815d49ac870ea10735cea
genomic_resource.yaml 2.08 KB 8f1187040d72632602c60f646a84c9ee
statistics/