Histone_ChIP-seq_ENCSR700VCN
Histone_ChIP-seq ENCSR700VCN [biosample_summary="Homo sapiens GM23338 originated from GM23248" and target="H3K9me2"]
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| Id: | Histone_ChIP-seq/ENCSR700VCN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR700VCN [biosamplesummary="Homo sapiens GM23338 originated from GM23248" and target="H3K9me2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN915YMA|/analyses/ENCAN915YMA/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF183PKF|/files/ENCFF183PKF/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline has 22105296 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me2-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF003AVG|/files/ENCFF003AVG/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline has 28872491 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me2-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR700VCN | float |
Histone_ChIP-seq_ENCSR700VCN |
Histone_ChIP-seq ENCSR700VCN [biosample_summary="Homo sapiens GM23338 originated from GM23248" and target="H3K9me2"]
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[1.59, 8.15] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF374IVL.bed.gz | 1.7 MB | 2375814a6e9c19c0f0e66b4458d77214 |
| ENCFF374IVL.bed.gz.dvc | 101.0 B | aee3aa9b1d4a19c332dd5f36b616733b |
| ENCFF374IVL.tabix.bed.gz | 853.64 KB | 717567b00fe9de22ada5835f17502ba5 |
| ENCFF374IVL.tabix.bed.gz.dvc | 106.0 B | 04994c9c8845f75c4ef40f4be7a091f5 |
| ENCFF374IVL.tabix.bed.gz.tbi | 385.21 KB | 0984b27e47cc0edf2009724a8510cda8 |
| ENCFF374IVL.tabix.bed.gz.tbi.dvc | 110.0 B | 0f1fce26c835ac81e1fa5fcc3da88e28 |
| genomic_resource.yaml | 2.46 KB | a3f347d2c5d3f1231b2af1af4fe8a8a0 |
| genomic_resource_original.yaml | 2.33 KB | 727433f4aae095c24557c0931ac31188 |
| statistics/ |